| Protein: | SEN54 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 467 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SEN54.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..467] | [1..467] |
|
|
0.0 | [9..342] | [2..318] |
|
|
4.0E-96 | [18..451] | [34..506] |
|
|
7.0E-57 | [33..202] | [22..178] |
|
|
3.0E-54 | [33..290] | [18..243] |
|
|
6.0E-43 | [19..335] | [4..354] |
|
|
1.0E-38 | [86..317] | [38..193] |
|
Region A: Residues: [1-381] |
1 11 21 31 41 51
| | | | | |
1 MQFAGKKTDQ VTTSNPGFEE EEEEEEELQQ DWSQLASLVS KNAALSLPKR GEKDYEPDGT 60
61 NLQDLLLYNA SKAMFDTISD SIRGTTVKSE VRGYYVPHKH QAVLLKPKGS FMQTMGRADS 120
121 TGELWLDFHE FVYLAERGTI LPYYRLEAGS NKSSKHETEI LLSMEDLYSL FSSQQEMDQY 180
181 FVFAHLKRLG FILKPSNQEA AVKTSFFPLK KQRSNLQAIT WRLLSLFKIQ ELSLFSGFFY 240
241 SKWNFFFRKY TTSPQLYQGL NRLVRSVAVP KNKKELLDAQ SDREFQKVKD IPLTFKVWKP 300
301 HSNFKKRDPG LPDFQVFVYN KNDDLQHFPT YKELRSMFSS LDYKFEFLSE IEDDDDWETN 360
361 SYVEDIPRKE YIHKRSAKSQ T
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [382-467] |
1 11 21 31 41 51
| | | | | |
1 EKSESSMKAS FQKKTAQSST KKKRKAYPPH IQQNRRLKTG YRSFIIAIMD NGLISFVKMS 60
61 EADFGSESVW YTPNTQKKVD QRWKKH
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [207-328] |
1 11 21 31 41 51
| | | | | |
1 FPLKKQRSNL QAITWRLLSL FKIQELSLFS GFFYSKWNFF FRKYTTSPQL YQGLNRLVRS 60
61 VAVPKNKKEL LDAQSDREFQ KVKDIPLTFK VWKPHSNFKK RDPGLPDFQV FVYNKNDDLQ 120
121 HF
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [329-467] |
1 11 21 31 41 51
| | | | | |
1 PTYKELRSMF SSLDYKFEFL SEIEDDDDWE TNSYVEDIPR KEYIHKRSAK SQTEKSESSM 60
61 KASFQKKTAQ SSTKKKRKAY PPHIQQNRRL KTGYRSFIIA IMDNGLISFV KMSEADFGSE 120
121 SVWYTPNTQK KVDQRWKKH
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
