| Protein: | VTC3 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 835 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for VTC3.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..835] | [1..835] |
|
|
0.0 | [1..813] | [1..783] |
|
|
0.0 | [1..802] | [1..772] |
|
|
0.0 | [1..807] | [1..722] |
|
|
0.0 | [242..835] | [1..585] |
|
Region A: Residues: [1-179] |
1 11 21 31 41 51
| | | | | |
1 MLFGIKLAND VYPPWKDSYI DYERLKKLLK ESVIHDGRSS VDSWSERNES DFVEALDKEL 60
61 EKVYTFQISK YNAVLRKLDD LEENTKSAEK IQKINSEQFK NTLEECLDEA QRLDNFDRLN 120
121 FTGFIKIVKK HDKLHPNYPS VKSLLQVRLK ELPFNNSEEY SPLLYRISYL YEFLRSNYD
|
| Detection Method: |  |
| Confidence: | 53.443697 |
| Match: | PF03105 |
| Description: | SPX domain |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [180-254] |
1 11 21 31 41 51
| | | | | |
1 HPNTVSKSLA STSKLSHFSN LEDASFKSYK FWVHDDNIME VKARILRHLP ALVYASVPNE 60
61 NDDFVDNLES DVRVQ
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [255-552] |
1 11 21 31 41 51
| | | | | |
1 PEARLNIGSK SNSLSSDGNS NQDVEIGKSK SVIFPQSYDP TITTLYFDND FFDLYNNRLL 60
61 KISGAPTLRL RWIGKLLDKP DIFLEKRTFT ENTETGNSSF EEIRLQMKAK FINNFIFKND 120
121 PSYKNYLINQ LRERGTQKEE LEKLSRDFDN IQNFIVEEKL QPVLRATYNR TAFQIPGDQS 180
181 IRVTIDSNIM YIREDSLDKN RPIRNPENWH RDDIDSNIPN PLRFLRAGEY SKFPYSVMEI 240
241 KVINQDNSQM PNYEWIKDLT NSHLVNEVPK FSLYLQGVAS LFGEDDKYVN ILPFWLPD
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [553-659] |
1 11 21 31 41 51
| | | | | |
1 LETDIRKNPQ EAYEEEKKTL QKQKSIHDKL DNMRRLSKIS VPDGKTTERQ GQKDQNTRHV 60
61 IADLEDHESS DEEGTALPKK SAVKKGKKFK TNAAFLKILA GKNISEN
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [660-835] |
1 11 21 31 41 51
| | | | | |
1 GNDPYSDDTD SASSFQLPPG VKKPVHLLKN AGPVKVEAKV WLANERTFNR WLSVTTLLSV 60
61 LTFSIYNSVQ KAEFPQLADL LAYVYFFLTL FCGVWAYRTY LKRLTLIKGR SGKHLDAPVG 120
121 PILVAVVLIV TLVVNFSVAF KEAARRERGL VNVSSQPSLP RTLKPIQDFI FNLVGE
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
