| Protein: | MRS6 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 603 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MRS6.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..603] | [1..603] |
|
|
0.0 | [45..434] | [3..374] |
|
|
0.0 | [45..434] | [3..374] |
|
|
0.0 | [45..434] | [3..374] |
|
|
0.0 | [45..434] | [3..374] |
|
|
0.0 | [45..434] | [3..374] |
|
Region A: Residues: [1-494] |
1 11 21 31 41 51
| | | | | |
1 MLSPERRPSM AERRPSFFSF TQNPSPLVVP HLAGIEDPLP ATTPDKVDVL IAGTGMVESV 60
61 LAAALAWQGS NVLHIDKNDY YGDTSATLTV DQIKRWVNEV NEGSVSCYKN AKLYVSTLIG 120
121 SGKYSSRDFG IDLSPKILFA KSDLLSILIK SRVHQYLEFQ SLSNFHTYEN DCFEKLTNTK 180
181 QEIFTDQNLP LMTKRNLMKF IKFVLNWEAQ TEIWQPYAER TMSDFLGEKF KLEKPQVFEL 240
241 IFSIGLCYDL NVKVPEALQR IRRYLTSFDV YGPFPALCSK YGGPGELSQG FCRSAAVGGA 300
301 TYKLNEKLVS FNPTTKVATF QDGSKVEVSE KVIISPTQAP KDSKHVPQQQ YQVHRLTCIV 360
361 ENPCTEWFNE GESAAMVVFP PGSLKSGNKE VVQAFILGAG SEICPEGTIV WYLSTTEQGP 420
421 RAEMDIDAAL EAMEMALLRE SSSGLENDEE IVQLTGNGHT IVNSVKLGQS FKEYVPRERL 480
481 QFLFKLYYTQ YTST
|
| Detection Method: |  |
| Confidence: | 418.228787 |
| Match: | 1gnd__ |
| Description: | Guanine nucleotide dissosiation inhibitor, GDI |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| small GTPase regulator activity | 1.82777033221452 | bayes_pls_golite062009 |
| binding | 1.71679209220564 | bayes_pls_golite062009 |
| GTPase regulator activity | 1.69589677829425 | bayes_pls_golite062009 |
| nucleoside-triphosphatase regulator activity | 1.67690582043816 | bayes_pls_golite062009 |
| transporter activity | 1.29839290134235 | bayes_pls_golite062009 |
| transcription regulator activity | 1.27958088282173 | bayes_pls_golite062009 |
| nucleic acid binding | 1.26584665095879 | bayes_pls_golite062009 |
| transmembrane transporter activity | 1.07862908893913 | bayes_pls_golite062009 |
| catalytic activity | 1.03127962968326 | bayes_pls_golite062009 |
| DNA binding | 1.02814395937345 | bayes_pls_golite062009 |
| enzyme regulator activity | 1.00883251592654 | bayes_pls_golite062009 |
| amine oxidase activity | 0.93095855430028 | bayes_pls_golite062009 |
| transcription factor activity | 0.569299976584703 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 0.556967966402473 | bayes_pls_golite062009 |
| GDP-dissociation inhibitor activity | 0.387378304822822 | bayes_pls_golite062009 |
| protein binding | 0.347133050347128 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 0.31459693204333 | bayes_pls_golite062009 |
|
Region A: Residues: [495-603] |
1 11 21 31 41 51
| | | | | |
1 PPFGVVNSSF FDVNQDLEKK YIPGASDNGV IYTTMPSAEI SYDEVVTAAK VLYEKIVGSD 60
61 DDFFDLDFED EDEIQASGVA NAEQFENAID DDDDVNMEGS GEFVGEMEI
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
