Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YOR088W.
| Description | E-value | Query Range |
Subject Range |
|
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2.0E-87 | [31..466] | [1500..1946] |
|
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8.0E-87 | [36..482] | [396..885] |
|
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1.0E-85 | [36..482] | [433..922] |
|
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2.0E-85 | [36..482] | [434..923] |
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5.0E-84 | [36..482] | [379..868] |
|
Region A: Residues: [1-72] |
1 11 21 31 41 51
| | | | | |
1 MDMERMDSPK WLGSHNFYQG RFTGGSVIDL SFQPRKIKGA CIPKLFADDL LILFLGLYTL 60
61 VVNGKDSERV QS
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.703 | a.64.1 | Saposin |
| View | Download | 0.534 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.525 | a.64.1 | Saposin |
| View | Download | 0.501 | a.4.9 | Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 |
| View | Download | 0.469 | a.64.1 | Saposin |
| View | Download | 0.464 | d.54.1 | Enolase N-terminal domain-like |
| View | Download | 0.433 | g.57.1 | Serine proteinase inhibitor lekti |
| View | Download | 0.380 | d.38.1 | Thioesterase/thiol ester dehydrase-isomerase |
| View | Download | 0.349 | d.52.7 | Ribosome-binding factor A, RbfA |
| View | Download | 0.343 | d.68.1 | Translation initiation factor IF3, C-terminal domain |
| View | Download | 0.337 | a.64.1 | Saposin |
| View | Download | 0.322 | d.52.3 | Prokaryotic type KH domain (KH-domain type II) |
| View | Download | 0.315 | a.64.1 | Saposin |
| View | Download | 0.308 | d.222.1 | YbaB-like |
| View | Download | 0.304 | d.15.7 | Immunoglobulin-binding domains |
| View | Download | 0.272 | d.19.1 | MHC antigen-recognition domain |
| View | Download | 0.266 | a.112.1 | Description not found. |
| View | Download | 0.266 | d.16.1 | FAD-linked reductases, C-terminal domain |
| View | Download | 0.261 | a.4.1 | Homeodomain-like |
| View | Download | 0.259 | d.50.2 | Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain |
| View | Download | 0.259 | a.108.1 | Ribosomal protein L7/12, oligomerisation (N-terminal) domain |
| View | Download | 0.245 | d.58.18 | Regulatory domain in the aminoacid metabolism |
| View | Download | 0.240 | a.39.1 | EF-hand |
| View | Download | 0.239 | d.14.1 | Ribosomal protein S5 domain 2-like |
| View | Download | 0.218 | d.56.1 | GroEL-intermediate domain like |
| View | Download | 0.210 | d.58.7 | RNA-binding domain, RBD |
| View | Download | 0.203 | d.54.1 | Enolase N-terminal domain-like |
|
Region A: Residues: [73-265] |
1 11 21 31 41 51
| | | | | |
1 FDLLESIFYV FNTGFILDEL TKLYYIGYAH LSFWNLFNDT TYLIITFAMG FRAMSVTPLN 60
61 AKYSSEDWDK ISYRVLSCAA PFVWSRLLLY LESQRFIGIM LVILKHMMKE SIVFFFLLFL 120
121 IMIGFTQGFL GLDSADGKRD ITGPILGNLT ITVLGLGSFD VFEEFAPPYA AILYYGYYFI 180
181 VSVILLNILI ALY
|
| Detection Method: | |
| Confidence: | 17.229148 |
| Match: | PF00520 |
| Description: | Ion transport protein |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [266-380] |
1 11 21 31 41 51
| | | | | |
1 STAYQKVIDN ADDEYMALMS QKTLRYIRAP DEDVYVSPLN LIEVFMTPIF RILPPKRAKD 60
61 LSYTVMTIVY SPFLLLISVK ETREARRIKY NRMKRLNDDA NEYDTPWDLT DGYLD
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.718 | N/A | N/A | a.73.1 | Retrovirus capsid protein, N-terminal core domain |
| View | Download | 0.647 | N/A | N/A | a.2.7 | tRNA-binding arm |
| View | Download | 0.569 | N/A | N/A | a.24.1 | Apolipoprotein |
| View | Download | 0.566 | N/A | N/A | a.22.1 | Histone-fold |
| View | Download | 0.531 | N/A | N/A | a.7.7 | BAG domain |
| View | Download | 0.472 | N/A | N/A | a.24.15 | FAD-dependent thiol oxidase |
| View | Download | 0.472 | N/A | N/A | a.5.4 | Elongation factor TFIIS domain 2 |
| View | Download | 0.471 | N/A | N/A | d.13.1 | HIT-like |
| View | Download | 0.464 | N/A | N/A | a.1.1 | Globin-like |
| View | Download | 0.457 | N/A | N/A | a.70.1 | N-terminal domain of the delta subunit of the F1F0-ATP synthase |
| View | Download | 0.450 | N/A | N/A | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.393 | N/A | N/A | a.36.1 | Signal peptide-binding domain |
| View | Download | 0.387 | N/A | N/A | a.56.1 | CO dehydrogenase ISP C-domain like |
| View | Download | 0.355 | N/A | N/A | a.47.2 | t-snare proteins |
| View | Download | 0.352 | N/A | N/A | d.122.1 | ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase |
| View | Download | 0.330 | N/A | N/A | a.7.5 | Tubulin chaperone cofactor A |
| View | Download | 0.325 | N/A | N/A | d.110.4 | SNARE-like |
| View | Download | 0.317 | N/A | N/A | a.28.3 | Retrovirus capsid protein C-terminal domain |
| View | Download | 0.310 | N/A | N/A | a.22.1 | Histone-fold |
| View | Download | 0.305 | N/A | N/A | f.17.1 | F1F0 ATP synthase subunit C |
| View | Download | 0.285 | N/A | N/A | d.188.1 | Prokaryotic ribosomal protein L17 |
| View | Download | 0.279 | N/A | N/A | a.77.1 | DEATH domain |
| View | Download | 0.279 | N/A | N/A | a.28.1 | ACP-like |
| View | Download | 0.277 | N/A | N/A | a.74.1 | Cyclin-like |
| View | Download | 0.270 | N/A | N/A | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.270 | N/A | N/A | a.73.1 | Retrovirus capsid protein, N-terminal core domain |
| View | Download | 0.264 | N/A | N/A | a.47.2 | t-snare proteins |
| View | Download | 0.264 | N/A | N/A | a.71.1 | Endoplasmic reticulum protein ERP29, C-domain |
| View | Download | 0.263 | N/A | N/A | a.39.3 | Cloroperoxidase |
| View | Download | 0.253 | N/A | N/A | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.252 | N/A | N/A | a.64.1 | Saposin |
| View | Download | 0.248 | N/A | N/A | a.24.17 | Group V grass pollen allergen |
| View | Download | 0.247 | N/A | N/A | a.100.1 | 6-phosphogluconate dehydrogenase C-terminal domain-like |
| View | Download | 0.246 | N/A | N/A | a.39.1 | EF-hand |
| View | Download | 0.244 | N/A | N/A | a.24.3 | Cytochromes |
| View | Download | 0.240 | N/A | N/A | a.22.1 | Histone-fold |
| View | Download | 0.237 | N/A | N/A | a.7.1 | Spectrin repeat |
| View | Download | 0.231 | N/A | N/A | c.23.1 | CheY-like |
| View | Download | 0.229 | N/A | N/A | d.67.3 | Ribosome recycling factor, RRF |
| View | Download | 0.226 | N/A | N/A | a.118.8 | TPR-like |
| View | Download | 0.224 | N/A | N/A | a.1.1 | Globin-like |
| View | Download | 0.221 | N/A | N/A | a.24.4 | Hemerythrin |
| View | Download | 0.219 | N/A | N/A | a.74.1 | Cyclin-like |
| View | Download | 0.219 | N/A | N/A | a.11.2 | Second domain of FERM |
| View | Download | 0.219 | N/A | N/A | a.1.1 | Globin-like |
| View | Download | 0.216 | N/A | N/A | a.23.1 | HSC20 (HSCB), C-terminal oligomerisation domain |
| View | Download | 0.216 | N/A | N/A | a.2.6 | Effector domain of the protein kinase pkn/prk1 |
| View | Download | 0.215 | N/A | N/A | a.26.1 | 4-helical cytokines |
| View | Download | 0.214 | N/A | N/A | a.24.9 | alpha-catenin/vinculin |
| View | Download | 0.209 | N/A | N/A | a.26.1 | 4-helical cytokines |
| View | Download | 0.208 | N/A | N/A | a.24.9 | alpha-catenin/vinculin |
| View | Download | 0.206 | N/A | N/A | a.52.1 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin |
| View | Download | 0.206 | N/A | N/A | a.7.1 | Spectrin repeat |
| View | Download | 0.204 | N/A | N/A | a.91.1 | Regulator of G-protein signalling, RGS |
|
Region A: Residues: [381-482] |
1 11 21 31 41 51
| | | | | |
1 DDDGLFSDNR NSGMRATQLK NSRSLKLQRT AEQEDVHFKV PKKWYKNVKK CSPSFEQYDN 60
61 DDTEDDAGED KDEVKELTKK VENLTAVITD LLEKLDIKDK KE
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.405 | N/A | N/A | a.4.12 | TrpR-like |
| View | Download | 0.403 | N/A | N/A | b.15.1 | HSP20-like chaperones |
| View | Download | 0.286 | N/A | N/A | a.59.1 | PAH2 domain |
| View | Download | 0.228 | N/A | N/A | c.55.7 | Methylated DNA-protein cysteine methyltransferase domain |
| View | Download | 0.227 | N/A | N/A | b.82.3 | cAMP-binding domain-like |
| View | Download | 0.210 | N/A | N/A | a.4.6 | C-terminal effector domain of the bipartite response regulators |
| View | Download | 0.202 | N/A | N/A | a.118.15 | Aconitase B, N-terminal domain |
| View | Download | 0.201 | N/A | N/A | a.26.1 | 4-helical cytokines |
