| Protein: | AGA1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 725 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for AGA1.
| Description | E-value | Query Range |
Subject Range |
|
|
318.0 | [0..2] | [722..1616] |
|
|
297.0 | [0..3] | [718..106] |
|
|
269.0 | [0..2] | [691..3457] |
|
Region A: Residues: [1-169] |
1 11 21 31 41 51
| | | | | |
1 MTLSFAHFTY LFTILLGLTN IALASDPETI LVTITKTNDA NGVVTTTVSP ALVSTSTIVQ 60
61 AGTTTLYTTW CPLTVSTSSA AEISPSISYA TTLSRFSTLT LSTEVCSHEA CPSSSTLPTT 120
121 TLSVTSKFTS YICPTCHTTA ISSLSEVGTT TVVSSSAIEP SSASIISPV
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [170-243] |
1 11 21 31 41 51
| | | | | |
1 TSTLSSTTSS NPTTTSLSST STSPSSTSTS PSSTSTSSSS TSTSSSSTST SSSSTSTSPS 60
61 STSTSSSLTS TSSS
|
| Detection Method: | |
| Confidence: | 14.39 |
| Match: | |
| Description: | No description for 1m2vB was found. |
|
Region A: Residues: [244-319] |
1 11 21 31 41 51
| | | | | |
1 STSTSQSSTS TSSSSTSTSP SSTSTSSSST STSPSSKSTS ASSTSTSSYS TSTSPSLTSS 60
61 SPTLASTSPS STSISS
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [320-453] |
1 11 21 31 41 51
| | | | | |
1 TFTDSTSSLG SSIASSSTSV SLYSPSTPVY SVPSTSSNVA TPSMTSSTVE TTVSSQSSSE 60
61 YITKSSISTT IPSFSMSTYF TTVSGVTTMY TTWCPYSSES ETSTLTSMHE TVTTDATVCT 120
121 HESCMPSQTT SLIT
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [454-602] |
1 11 21 31 41 51
| | | | | |
1 SSIKMSTKNV ATSVSTSTVE SSYACSTCAE TSHSYSSVQT ASSSSVTQQT TSTKSWVSSM 60
61 TTSDEDFNKH ATGKYHVTSS GTSTISTSVS EATSTSSIDS ESQEQSSHLL STSVLSSSSL 120
121 SATLSSDSTI LLFSSVSSLS VEQSPVTTL
|
| Detection Method: | |
| Confidence: | 11.45 |
| Match: | |
| Description: | No description for 1deqA was found. |
|
Region A: Residues: [603-725] |
1 11 21 31 41 51
| | | | | |
1 QISSTSEILQ PTSSTAIATI SASTSSLSAT SISTPSTSVE STIESSSLTP TVSSIFLSSS 60
61 SAPSSLQTSV TTTEVSTTSI SIQYQTSSMV TISQYMGSGS QTRLPLGKLV FAIMAVACNV 120
121 IFS
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
