| Protein: | AGA1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 725 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for AGA1.
| Description | E-value | Query Range |
Subject Range |
|
|
318.0 | [0..2] | [722..1616] |
|
|
297.0 | [0..3] | [718..106] |
|
|
269.0 | [0..2] | [691..3457] |
|
Region A: Residues: [1-169] |
1 11 21 31 41 51
| | | | | |
1 MTLSFAHFTY LFTILLGLTN IALASDPETI LVTITKTNDA NGVVTTTVSP ALVSTSTIVQ 60
61 AGTTTLYTTW CPLTVSTSSA AEISPSISYA TTLSRFSTLT LSTEVCSHEA CPSSSTLPTT 120
121 TLSVTSKFTS YICPTCHTTA ISSLSEVGTT TVVSSSAIEP SSASIISPV
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [170-243] |
1 11 21 31 41 51
| | | | | |
1 TSTLSSTTSS NPTTTSLSST STSPSSTSTS PSSTSTSSSS TSTSSSSTST SSSSTSTSPS 60
61 STSTSSSLTS TSSS
|
| Detection Method: | |
| Confidence: | 14.39 |
| Match: | |
| Description: | No description for 1m2vB was found. |
|
Region A: Residues: [244-319] |
1 11 21 31 41 51
| | | | | |
1 STSTSQSSTS TSSSSTSTSP SSTSTSSSST STSPSSKSTS ASSTSTSSYS TSTSPSLTSS 60
61 SPTLASTSPS STSISS
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.389 | d.58.10 | Acylphosphatase-like |
| View | Download | 0.379 | d.58.10 | Acylphosphatase-like |
| View | Download | 0.339 | a.28.1 | ACP-like |
| View | Download | 0.337 | d.51.1 | Eukaryotic type KH-domain (KH-domain type I) |
| View | Download | 0.316 | d.58.1 | 4Fe-4S ferredoxins |
| View | Download | 0.304 | a.60.1 | SAM/Pointed domain |
|
Region A: Residues: [320-453] |
1 11 21 31 41 51
| | | | | |
1 TFTDSTSSLG SSIASSSTSV SLYSPSTPVY SVPSTSSNVA TPSMTSSTVE TTVSSQSSSE 60
61 YITKSSISTT IPSFSMSTYF TTVSGVTTMY TTWCPYSSES ETSTLTSMHE TVTTDATVCT 120
121 HESCMPSQTT SLIT
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.470 | N/A | N/A | d.316.1 | Description not found. |
| View | Download | 0.366 | N/A | N/A | b.1.1 | Immunoglobulin |
| View | Download | 0.323 | N/A | N/A | d.129.3 | Bet v1-like |
| View | Download | 0.299 | N/A | N/A | d.17.4 | NTF2-like |
| View | Download | 0.291 | N/A | N/A | b.1.1 | Immunoglobulin |
| View | Download | 0.286 | N/A | N/A | d.89.1 | Origin of replication-binding domain, RBD-like |
| View | Download | 0.238 | N/A | N/A | b.1.1 | Immunoglobulin |
|
Region A: Residues: [454-602] |
1 11 21 31 41 51
| | | | | |
1 SSIKMSTKNV ATSVSTSTVE SSYACSTCAE TSHSYSSVQT ASSSSVTQQT TSTKSWVSSM 60
61 TTSDEDFNKH ATGKYHVTSS GTSTISTSVS EATSTSSIDS ESQEQSSHLL STSVLSSSSL 120
121 SATLSSDSTI LLFSSVSSLS VEQSPVTTL
|
| Detection Method: | |
| Confidence: | 11.45 |
| Match: | |
| Description: | No description for 1deqA was found. |
|
Region A: Residues: [603-725] |
1 11 21 31 41 51
| | | | | |
1 QISSTSEILQ PTSSTAIATI SASTSSLSAT SISTPSTSVE STIESSSLTP TVSSIFLSSS 60
61 SAPSSLQTSV TTTEVSTTSI SIQYQTSSMV TISQYMGSGS QTRLPLGKLV FAIMAVACNV 120
121 IFS
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.731 | N/A | N/A | d.129.3 | Bet v1-like |
| View | Download | 0.686 | N/A | N/A | a.60.10 | Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain |
| View | Download | 0.686 | N/A | N/A | a.60.10 | Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain |
| View | Download | 0.614 | N/A | N/A | a.40.1 | Calponin-homology domain, CH-domain |
| View | Download | 0.603 | N/A | N/A | a.1.1 | Globin-like |
| View | Download | 0.558 | N/A | N/A | d.17.4 | NTF2-like |
| View | Download | 0.547 | N/A | N/A | c.51.2 | TolB, N-terminal domain |
| View | Download | 0.536 | N/A | N/A | d.129.3 | Bet v1-like |
| View | Download | 0.515 | N/A | N/A | a.40.1 | Calponin-homology domain, CH-domain |
