| Protein: | MDJ2 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 146 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MDJ2.
| Description | E-value | Query Range |
Subject Range |
|
|
9.0E-32 | [19..143] | [20..142] |
|
|
3.0E-28 | [1..146] | [1..146] |
|
|
3.0E-24 | [32..144] | [32..153] |
|
|
6.0E-24 | [80..143] | [1..61] |
|
|
1.0E-23 | [80..143] | [1..61] |
|
|
1.0E-23 | [80..145] | [1..65] |
|
|
1.0E-23 | [81..145] | [1..64] |
|
Region A: Residues: [1-82] |
1 11 21 31 41 51
| | | | | |
1 MVLPIIIGLG VTMVALSVKS GLNAWTVYKT LSPLTIAKLN NIRIENPTAG YRDALKFKSS 60
61 LIDEELKNRL NQYQGGFAPR MT
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.699 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.588 | a.4.1 | Homeodomain-like |
| View | Download | 0.549 | a.52.1 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin |
| View | Download | 0.590 | a.4.9 | Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 |
| View | Download | 0.529 | c.55.7 | Methylated DNA-protein cysteine methyltransferase domain |
| View | Download | 0.513 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.507 | b.55.1 | PH domain-like |
| View | Download | 0.497 | a.60.3 | C-terminal domain of RNA polymerase alpha subunit |
| View | Download | 0.491 | d.50.3 | PI-Pfui intein middle domain |
| View | Download | 0.476 | a.60.2 | RuvA domain 2-like |
| View | Download | 0.460 | a.64.1 | Saposin |
| View | Download | 0.455 | a.150.1 | Anti-sigma factor AsiA |
| View | Download | 0.450 | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.448 | b.55.1 | PH domain-like |
| View | Download | 0.441 | d.15.1 | Ubiquitin-like |
| View | Download | 0.415 | a.3.1 | Cytochrome c |
| View | Download | 0.401 | a.108.1 | Ribosomal protein L7/12, oligomerisation (N-terminal) domain |
| View | Download | 0.398 | b.1.1 | Immunoglobulin |
| View | Download | 0.387 | i.1.1 | Ribosome and ribosomal fragments |
| View | Download | 0.385 | f.34.1 | Mechanosensitive channel protein MscS (YggB), transmembrane region |
| View | Download | 0.377 | b.71.1 | Glycosyl hydrolase domain |
| View | Download | 0.366 | b.7.2 | Periplasmic chaperone C-domain |
| View | Download | 0.365 | d.58.17 | Metal-binding domain |
| View | Download | 0.365 | a.156.1 | S13-like H2TH domain |
| View | Download | 0.361 | a.21.1 | HMG-box |
| View | Download | 0.344 | a.65.1 | Annexin |
| View | Download | 0.334 | b.36.1 | PDZ domain-like |
| View | Download | 0.333 | d.58.43 | Mechanosensitive channel protein MscS (YggB), C-terminal domain |
| View | Download | 0.321 | d.230.1 | N-terminal, heterodimerisation domain of RBP4 (RpoE) |
| View | Download | 0.319 | b.1.1 | Immunoglobulin |
| View | Download | 0.312 | a.46.1 | Methionine synthase domain |
| View | Download | 0.303 | a.51.1 | Cytochrome c oxidase subunit h |
| View | Download | 0.301 | a.39.1 | EF-hand |
| View | Download | 0.300 | a.138.1 | Multiheme cytochromes |
| View | Download | 0.286 | b.61.3 | D-aminopeptidase, middle and C-terminal domains |
| View | Download | 0.285 | a.64.1 | Saposin |
| View | Download | 0.282 | a.64.1 | Saposin |
| View | Download | 0.281 | d.68.1 | Translation initiation factor IF3, C-terminal domain |
| View | Download | 0.270 | a.159.1 | Protein serine/threonine phosphatase 2C, C-terminal domain |
| View | Download | 0.270 | a.130.1 | Chorismate mutase II |
| View | Download | 0.265 | d.52.7 | Ribosome-binding factor A, RbfA |
| View | Download | 0.264 | a.5.2 | UBA-like |
| View | Download | 0.254 | a.60.1 | SAM/Pointed domain |
| View | Download | 0.252 | b.7.3 | PHL pollen allergen |
| View | Download | 0.246 | d.192.1 | YlxR-like |
| View | Download | 0.237 | a.23.5 | Hemolysin expression modulating protein HHA |
| View | Download | 0.235 | f.13.1 | Family A G protein-coupled receptor-like |
| View | Download | 0.234 | a.181.1 | Antibiotic binding domain of TipA-like multidrug resistance regulators |
| View | Download | 0.232 | a.61.1 | Retroviral matrix proteins |
| View | Download | 0.230 | d.15.6 | Superantigen toxins, C-terminal domain |
| View | Download | 0.227 | d.93.1 | SH2 domain |
| View | Download | 0.223 | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.223 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.220 | a.181.1 | Antibiotic binding domain of TipA-like multidrug resistance regulators |
| View | Download | 0.211 | d.170.2 | A heparin-binding domain |
| View | Download | 0.208 | a.46.2 | Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain |
| View | Download | 0.207 | b.61.3 | D-aminopeptidase, middle and C-terminal domains |
| View | Download | 0.207 | a.138.1 | Multiheme cytochromes |
| View | Download | 0.205 | d.93.1 | SH2 domain |
|
Region A: Residues: [83-146] |
1 11 21 31 41 51
| | | | | |
1 EPEALLILDI SAREINHLDE KLLKKKHRKA MVRNHPDRGG SPYMAAKINE AKEVLERSVL 60
61 LRKR
|
| Detection Method: | |
| Confidence: | 17.39794 |
| Match: | 1hdj__ |
| Description: | HSP40 |
Matching Structure (courtesy of the PDB): |
|
