Protein Overview: gi|224500508

General Information:
Name(s) found:	gi\|224500508 [NCBI NR]
Description(s) found:	gi\|224500508\|ref\|ZP_03668857.1\| heat shock protein DnaJ [Listeria monocytogenes Finland 1988] [NCBI NR]
Organism:	Listeria monocytogenes Finland 1998
Length:	377 amino acids
Gene Ontology:
Cellular Component:	NONE FOUND
Biological Process:	NONE FOUND
Molecular Function:	NONE FOUND

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKRDYYEVL GISKSASADE IKKAYRKLSK QYHPDINKEA GADEKFKEIS EAYEALSDPQ  60
   61 KRAQYDQYGH VDPNQGFGGG GAGGGFGGGG FSGFEDIFDT FFGGGGRQQD PNAPRQGSDL 120
  121 QYTMRLKFKE AIFGKDAEIE IPREENCDTC HGSGAKPGTT PEKCSHCGGK GSINVEQNTP 180
  181 FGRVVNKRTC QYCNGTGKEI KEKCPTCHGK GRVTKTKKIK VKVPAGVNDG QQMRVSGEGE 240
  241 AGINGGPNGD LYVVFVVIPD EFFEREADDI YVEVPITFVQ ATLGDEIDVP TVHGKVRLKI 300
  301 PSGTQTGTTF RLRGKGVPHL RGNGTGDQHV IVKVIVPKKL DDKQKEILRE FASTTGDKVD 360
  361 EQTSGFFDKM KRAFKGD

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

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No microscopy data found in the PDR for this protein.

Protein Structure Data

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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#		Region(s)	Method	Confidence	Match Description
1	View Details	[1..89]	PSI-BLAST	23.0	J-DOMAIN (RESIDUES 1-77) OF THE ESCHERICHIA COLI N-TERMINAL FRAGMENT (RESIDUES 1-104) OF THE MOLECULAR CHAPERONE DNAJ, NMR, 20 STRUCTURES
2	View Details	[90..377]	PSI-BLAST	44.69897	The crystal structure of Hsp40 Ydj1

Functions predicted (by domain):

#

Gene Ontology predictions

1

Term	Confidence	Notes
unfolded protein binding	3.04403163860617	bayes_pls_golite062009
protein binding	2.65982681685488	bayes_pls_golite062009
binding	2.63138872417193	bayes_pls_golite062009
transcription regulator activity	2.31739509739943	bayes_pls_golite062009
heat shock protein binding	2.17994194200939	bayes_pls_golite062009
DNA binding	1.88444505115207	bayes_pls_golite062009
nucleic acid binding	1.73387701301727	bayes_pls_golite062009
chaperone binding	1.61155546076854	bayes_pls_golite062009
nucleoside-triphosphatase regulator activity	0.927337691912581	bayes_pls_golite062009
enzyme regulator activity	0.675735261884317	bayes_pls_golite062009
Hsp70 protein binding	0.541755903922701	bayes_pls_golite062009
transferase activity	0.240656521918556	bayes_pls_golite062009
GTPase regulator activity	0.130185025729857	bayes_pls_golite062009
catalytic activity	0.106988907594358	bayes_pls_golite062009
phosphotransferase activity, alcohol group as acceptor	0.0276971914937192	bayes_pls_golite062009

2

Term	Confidence	Notes
binding	2.7298921704023	bayes_pls_golite062009
protein binding	2.6297172985864	bayes_pls_golite062009
protein disulfide isomerase activity	2.4409950647303	bayes_pls_golite062009
intramolecular oxidoreductase activity, transposing S-S bonds	2.4409950647303	bayes_pls_golite062009
intramolecular oxidoreductase activity, interconverting keto- and enol-groups	2.23398279564144	bayes_pls_golite062009
unfolded protein binding	2.04158808514315	bayes_pls_golite062009
nucleoside-triphosphatase regulator activity	0.594882036388263	bayes_pls_golite062009
enzyme regulator activity	0.301226589648736	bayes_pls_golite062009
catalytic activity	0.276917867171685	bayes_pls_golite062009

Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

Philius Transmembrane Prediction:

Protein predicted to be:	GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification:	0.98

Source: Reynolds et al. (2008)

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle