| Protein: | MID1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 548 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MID1.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..548] | [1..548] |
|
|
0.0 | [123..507] | [93..430] |
|
|
0.0 | [123..507] | [93..430] |
|
Region A: Residues: [1-245] |
1 11 21 31 41 51
| | | | | |
1 MIVWQALFVV YCLFTTSIHG LFQDFNPFAN KNISLKFPSL NRWEKNVMAT GQQTIINSDS 60
61 IYEWTPILSN ITAGKKDSFV FTIDAEASGY GFAPTYEVLM FISGNICQMP MNRSDVDLTI 120
121 YYSFNETVLE NPNIGQSAVF QDGYIQALAI SPVQSSSSNA TSTYSNLYVV AELVNSTTEQ 180
181 PLSSSDASEN WEYRLSISEN DLVFQWDVRP WVEVLDTDMN SALLSTGNVT ADAKVYHNYS 240
241 IYDPS
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [246-548] |
1 11 21 31 41 51
| | | | | |
1 LYDLYVYSYE DSVQLNQNYN LSLCAVKNGP YLVSSQNTSN ATVTSNSTNP LERTDLAIQK 60
61 KITEYGGSVT EMFYVTGLNA STTYVAYLTK KISNGDGLSS VGGILFSHVY FTTRSTDVCS 120
121 LIFGLDFCSD VAYSVPTSSF SVGNKTLMAQ TYDHIAEALY ANFSKALQLI SCDADKDARY 180
181 SPVMTCDDCA EAYRDWVCAV SIPRCTTTSS QYYIHRDKSH NRNDYLNKFI KPLDDYYEIL 240
241 PCIDMCYTLV RNCPSDFQFS CPNDLTTEDL LYQSYNFYMD TDYSTCNYIG NSSLMVIHPL 300
301 DDT
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [218-341] |
1 11 21 31 41 51
| | | | | |
1 DMNSALLSTG NVTADAKVYH NYSIYDPSLY DLYVYSYEDS VQLNQNYNLS LCAVKNGPYL 60
61 VSSQNTSNAT VTSNSTNPLE RTDLAIQKKI TEYGGSVTEM FYVTGLNAST TYVAYLTKKI 120
121 SNGD
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [342-548] |
1 11 21 31 41 51
| | | | | |
1 GLSSVGGILF SHVYFTTRST DVCSLIFGLD FCSDVAYSVP TSSFSVGNKT LMAQTYDHIA 60
61 EALYANFSKA LQLISCDADK DARYSPVMTC DDCAEAYRDW VCAVSIPRCT TTSSQYYIHR 120
121 DKSHNRNDYL NKFIKPLDDY YEILPCIDMC YTLVRNCPSD FQFSCPNDLT TEDLLYQSYN 180
181 FYMDTDYSTC NYIGNSSLMV IHPLDDT
|
| Detection Method: | |
| Confidence: | 1.62 |
| Match: | 1ijxA |
| Description: | Secreted Frizzled-related protein 3 (SFRP-3;fzb) |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| transmembrane receptor activity | 1.81467703148571 | bayes_pls_golite062009 |
| receptor activity | 1.79586924429875 | bayes_pls_golite062009 |
| binding | 1.58747760460167 | bayes_pls_golite062009 |
| protein binding | 1.24658797699128 | bayes_pls_golite062009 |
| signal transducer activity | 1.02200332848929 | bayes_pls_golite062009 |
| molecular transducer activity | 1.02200332848929 | bayes_pls_golite062009 |
| Wnt receptor activity | 0.268954856682316 | bayes_pls_golite062009 |
