| Protein: | PDR17 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 350 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PDR17.
| Description | E-value | Query Range |
Subject Range |
|
|
2.0E-76 | [1..350] | [1..350] |
|
|
2.0E-67 | [6..328] | [22..366] |
|
|
2.0E-65 | [6..343] | [546..874] |
|
|
2.0E-64 | [6..310] | [22..350] |
|
|
3.0E-63 | [6..328] | [22..369] |
|
Region A: Residues: [1-117] |
1 11 21 31 41 51
| | | | | |
1 MGLFSRKRDH TPAVPKEKLI PCDKIFLDPP AKYGNAPLLE PISEDQNEKY RAVLRHFQDD 60
61 DLKLPENLND LDNGTHANDR PLSDWEKFWL SRECFLRYLR ANKWNTANAI KGLTKTL
|
| Detection Method: |  |
| Confidence: | 113.68867 |
| Match: | 1aua__ |
| Description: | N-terminal domain of phosphatidylinositol transfer protein sec14p; C-terminal domain of phosphatidylinositol transfer protein sec14p |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| phospholipid transporter activity | 4.82372291869245 | bayes_pls_golite062009 |
| lipid transporter activity | 3.44932625048477 | bayes_pls_golite062009 |
| phosphatidylinositol transporter activity | 3.08477039249457 | bayes_pls_golite062009 |
| binding | 1.41701101210975 | bayes_pls_golite062009 |
| transporter activity | 1.00447017621654 | bayes_pls_golite062009 |
| vitamin binding | 0.87942237566918 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 0.658164745879483 | bayes_pls_golite062009 |
| vitamin E binding | 0.425230876259729 | bayes_pls_golite062009 |
| protein binding | 0.132818074687599 | bayes_pls_golite062009 |
|
Region A: Residues: [118-350] |
1 11 21 31 41 51
| | | | | |
1 VWRREIGLTH GKEDKDPLTA DKVAVENETG KQVILGFDNA KRPLYYMKNG RQNTESSFRQ 60
61 VQELVYMMET ATTVAPQGVE KITVLVDFKS YKEPGIITDK APPISIARMC LNVMQDHYPE 120
121 RLAKCVLINI PWFAWAFLKM MYPFLDPATK AKAIFDEPFE NHIEPSQLDA LYNGLLDFKY 180
181 KHEVYWPDMV KKVDDLRLKR FDRFLKFGGI VGLSEYDTKG QHDELKYPVD MVI
|
| Detection Method: | |
| Confidence: | 113.68867 |
| Match: | 1aua__ |
| Description: | N-terminal domain of phosphatidylinositol transfer protein sec14p; C-terminal domain of phosphatidylinositol transfer protein sec14p |
| Matching Structure (courtesy of the PDB): |
|
