| Protein: | POP1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 875 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for POP1.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..875] | [1..875] |
|
|
0.0 | [5..685] | [1..589] |
|
|
0.0 | [370..788] | [317..760] |
|
|
0.0 | [370..788] | [438..872] |
|
|
3.0E-45 | [229..382] | [52..205] |
|
|
4.0E-45 | [227..695] | [93..535] |
|
|
1.0E-12 | [5..80] | [4..64] |
|
Region A: Residues: [1-125] |
1 11 21 31 41 51
| | | | | |
1 MSGSLSRGNG GKKVLNKNQL LKRNRIRNAR SIRAEAVAAS STKTGTPSDL SESGSKLNVD 60
61 QFISSRQFEV KQLQLAMHNS KAASSTRIFQ ALPRKLRRRT ASHNVRRIPK RMRNRALREM 120
121 RKSDQ
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [126-353] |
1 11 21 31 41 51
| | | | | |
1 QDVLKGSSAS SRKAHGLNAK QLYKARMSIK LLRLASKSTS MKLSMPPEVT SSNCHVRQKI 60
61 KTLKRMIKES STANPNIKLL NNRMGSYDCT GVNELAPIPK GRVKYTKRQK HFAWLPTHIW 120
121 NAKRSHMMKR WGYQMVWAPT QKCFKLTHRL GGDTCSSDGA LCMDSSYIGT IIVKDKSNDS 180
181 EGDFLKSIIG KLTAERANLR KYREGQVLFQ GLIYSFNEEN GEDSTKPL
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
| Term | Confidence | Notes |
| methyltransferase activity | 1.83230066187063 | bayes_pls_golite062009 |
| transferase activity, transferring one-carbon groups | 1.757479064419 | bayes_pls_golite062009 |
| catalytic activity | 1.52741791343033 | bayes_pls_golite062009 |
| binding | 1.07222887529954 | bayes_pls_golite062009 |
| transferase activity | 0.0529926681035639 | bayes_pls_golite062009 |
|
Region A: Residues: [354-800] |
1 11 21 31 41 51
| | | | | |
1 GPCDVFWVQK DTAIIRLHPS IYTQVFNILL QHKEKLTVQD CRYSLASVTL KGAKALESLA 60
61 SCLRSTEYSK SFEQFKMVSM ITDHNALPQR CTFAFEAIDP RHLAAPKKLN DSQRKTVNSD 120
121 DILSLHENYP QDEINAVFNE LCDPESRTQS YNNQNTLKEI SARRYKLLTA TPNSINKTTV 180
181 PFKESDDPSI PLVIIRRLKT RDWIVVLPWF WLLPLWHLLN RIPRMYHIGL RQFQQIQYEN 240
241 KQLYFPDDYP FTQLGYIENS FYKKEASKTK WDRKPMGKRI NFEKIKDIHN TKLPAYSGEI 300
301 GDFFSSDWRF LQILRNGIDY LQRNDKTLEL MDSKKTGQFN AQGVRDINCV NDVLEFCKDY 360
361 EAKTKAMSLS IEENIPVALC KNRKCQFRTP DSISVNSSSF SLTFFPRCII AVSCTLLERG 420
421 HPKDNARIYQ VPEKDLEHWL QLAKGVY
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [801-875] |
1 11 21 31 41 51
| | | | | |
1 RPNGRKDHDL KIPLPEVHDL IGFITSGTYH LNCGNGMGIG FIDHHAAIRQ PTRYVLIRNV 60
61 GTNTYRLGEW SKISV
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
