| Protein: | UBP10 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 792 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for UBP10.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..770] | [1..770] |
|
|
4.0E-83 | [165..739] | [88..619] |
|
|
8.0E-83 | [166..739] | [89..618] |
|
|
1.0E-81 | [330..733] | [212..588] |
|
|
4.0E-74 | [6..785] | [311..1107] |
|
Region A: Residues: [1-260] |
1 11 21 31 41 51
| | | | | |
1 MTTQESIKPL VDRILSNPLQ FNAAMISNKS NNNDTSAAPE NSSYIVIGKQ HNNNSNSTAI 60
61 AATAESKQIK ENNLIDRPNG KKTNTVPKSM AEALLLYTSK NDKDAADATG AKKSAELSTE 120
121 LSTEPPSSSS EDDKVGKEEE EEGEIFHEAR DYVEPRKASL KERDNADKGD GEDIGEDIGE 180
181 DIGEDIGEDI GEDIGENLGS PLATIDDSSN ENEKEKRKEL STSISSDDEI EDDEDEDDMD 240
241 YDSSAMEKEL PEEEENDSSS
|
| Detection Method: |  |
| Confidence: | 14.16 |
| Match: | 1ldvA |
| Description: | No description for 1ldvA was found. |
|
Region A: Residues: [261-323] |
1 11 21 31 41 51
| | | | | |
1 KISEGEKKSL YQDLMENSTV EVNRYEPVNN TKENGNRNPK GEEEEEEEED LKHKSRSITP 60
61 PVT
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [324-426] |
1 11 21 31 41 51
| | | | | |
1 ISNLSNFYQF NENINDRGSL NSTRIVKNWG DKFTNLKPRG LLNHGVTCYT NAAVQAMLHI 60
61 PSIQHYLFDI LMGKYDSTIS KNSVSYTLAE TSKKMWLPVS KNP
|
| Detection Method: | |
| Confidence: | 11.136677 |
| Match: | PF00442 |
| Description: | No description for PF00442 was found. |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [427-560] |
1 11 21 31 41 51
| | | | | |
1 RKNVSASYIN PKHLISRLDD INCMMSEWQQ EDSHEYFMSL MSRLQEDSVP KGHKLIESII 60
61 YDIFGGLLKQ IVTCKSCGSI SKTEQPFYDL SLHLKGKKKL DPNSDLSSDS INGTSATTST 120
121 TTSNAATKPS LSSS
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [561-649] |
1 11 21 31 41 51
| | | | | |
1 SSVNLNNGSP FAAASDLSSA NRRFSIEKSI KDFFNPELIK VDKEQKGYVC EKCHKTTNAV 60
61 KHSSILRAPE TLLVHLKKFR FNGTSSSKM
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [650-792] |
1 11 21 31 41 51
| | | | | |
1 KQAVSYPMFL DLTEYCESKE LPVKYQLLSV VVHEGRSLSS GHYIAHCKQP DGSWATYDDE 60
61 YINIISERDV LKEPNAYYLL YTRLTPKSVP LPLAKSAMAT GNVTSKSKQE QAVNEPNNRP 120
121 LKINSKKNNR KKWKKNKKRK FTK
|
| Detection Method: | |
| Confidence: | 25.522879 |
| Match: | PF00443 |
| Description: | Ubiquitin carboxyl-terminal hydrolase |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
