| Protein: | SPC98 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 846 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPC98.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..846] | [1..846] |
|
|
0.0 | [24..845] | [30..812] |
|
|
0.0 | [88..799] | [131..869] |
|
|
0.0 | [42..719] | [55..772] |
|
|
0.0 | [42..720] | [55..773] |
|
Region A: Residues: [1-158] |
1 11 21 31 41 51
| | | | | |
1 MELEPTLFGI IEALAPQLLS QSHLQTFVSD VVNLLRSSTK SATQLGPLID FYKLQSLDSP 60
61 ETTIMWHKIE KFLDALFGIQ NTDDMVKYLS VFQSLLPSNY RAKIVQKSSG LNMENLANHE 120
121 HLLSPVRAPS IYTEASFENM DRFSERRSMV SSPNRYVP
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [159-707] |
1 11 21 31 41 51
| | | | | |
1 SSTYSSVTLR QLSNPYYVNT IPEEDILKYV SYTLLATTSA LFPFDHEQIQ IPSKIPNFES 60
61 GLLHLIFEAG LLYQSLGYKV EKFRMLNISP MKKALIIEIS EELQNYTAFV NNLVSSGTVV 120
121 SLKSLYREIY ENIIRLRIYC RFTEHLEELS GDTFLIELNI FKSHGDLTIR KIATNLFNSM 180
181 ISLYYEYLMN WLTKGLLRAT YGEFFIAENT DTNGTDDDFI YHIPIEFNQE RVPAFIPKEL 240
241 AYKIFMIGKS YIFLEKYCKE VQWTNEFSKK YHVLYQSNSY RGISTNFFEI INDQYSEIVN 300
301 HTNQILNQKF HYRDVVFALK NILLMGKSDF MDALIEKAND ILATPSDSLP NYKLTRVLQE 360
361 AVQLSSLRHL MNSPRNSSVI NGLDARVLDL GHGSVGWDVF TLDYILYPPL SLVLNVNRPF 420
421 GRKEYLRIFN FLWRFKKNNY FYQKEMLKSN DIIRSFKKIR GYNPLIRDII NKLSRISILR 480
481 TQFQQFNSKM ESYYLNCIIE ENFKEMTRKL QRTENKSQNQ FDLIRLNNGT IELNGILTPK 540
541 AEVLTKSSS
|
| Detection Method: | |
| Confidence: | 7.19 |
| Match: | 1b89A |
| Description: | Clathrin heavy chain proximal leg segment |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| cytoskeletal protein binding | 2.57708254106901 | bayes_pls_golite062009 |
| binding | 2.38363524631144 | bayes_pls_golite062009 |
| protein binding | 1.81870125631028 | bayes_pls_golite062009 |
| actin binding | 1.74253257307802 | bayes_pls_golite062009 |
|
Region A: Residues: [708-846] |
1 11 21 31 41 51
| | | | | |
1 SKPQKHAIEK TLNIDELESV HNTFLTNILS HKLFATNTSE ISVGDYSGQP YPTSLVLLLN 60
61 SVYEFVKVYC NLNDIGYEIF IKMNLNDHEA SNGLLGKFNT NLKEIVSQYK NFKDRLYIFR 120
121 ADLKNDGDEE LFLLSKSLR
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
| Term | Confidence | Notes |
| binding | 1.31927971777231 | bayes_pls_golite062009 |
| protein binding | 0.614639185145051 | bayes_pls_golite062009 |
| catalytic activity | 0.370165934559297 | bayes_pls_golite062009 |
