| Protein: | PRC1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 532 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PRC1.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..532] | [1..532] |
|
|
0.0 | [5..530] | [6..540] |
|
|
0.0 | [5..530] | [6..540] |
|
|
0.0 | [3..532] | [9..537] |
|
|
0.0 | [11..531] | [9..521] |
|
|
0.0 | [57..528] | [60..549] |
|
|
0.0 | [112..532] | [1..420] |
|
Region A: Residues: [1-78] |
1 11 21 31 41 51
| | | | | |
1 MKAFTSLLCG LGLSTTLAKA ISLQRPLGLD KDVLLQAAEK FGLDLDLDHL LKELDSNVLD 60
61 AWAQIEHLYP NQVMSLET
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [79-282] |
1 11 21 31 41 51
| | | | | |
1 STKPKFPEAI KTKKDWDFVV KNDAIENYQL RVNKIKDPKI LGIDPNVTQY TGYLDVEDED 60
61 KHFFFWTFES RNDPAKDPVI LWLNGGPGCS SLTGLFFELG PSSIGPDLKP IGNPYSWNSN 120
121 ATVIFLDQPV NVGFSYSGSS GVSNTVAAGK DVYNFLELFF DQFPEYVNKG QDFHIAGESY 180
181 AGHYIPVFAS EILSHKDRNF NLTS
|
|
Region B: Residues: [376-416] |
1 11 21 31 41 51
| | | | | |
1 GNLCYPTLQD IDDYLNQDYV KEAVGAEVDH YESCNFDINR N
|
| Detection Method: | |
| Confidence: | 10157.0 |
| Match: | 1ysc__ |
| Description: | Serine carboxypeptidase II |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| hydrolase activity | 4.09944423676394 | bayes_pls_golite062009 |
| peptidase activity | 2.49064988313037 | bayes_pls_golite062009 |
| peptidase activity, acting on L-amino acid peptides | 2.10044305272656 | bayes_pls_golite062009 |
| hydrolase activity, acting on ester bonds | 1.83678475999803 | bayes_pls_golite062009 |
| palmitoyl-(protein) hydrolase activity | 1.46950384675756 | bayes_pls_golite062009 |
| catalytic activity | 1.39629727416851 | bayes_pls_golite062009 |
| palmitoyl-CoA hydrolase activity | 0.815337671271829 | bayes_pls_golite062009 |
| thiolester hydrolase activity | 0.49805374409569 | bayes_pls_golite062009 |
| endopeptidase activity | 0.43631945855397 | bayes_pls_golite062009 |
|
Region A: Residues: [283-375] |
1 11 21 31 41 51
| | | | | |
1 VLIGNGLTDP LTQYNYYEPM ACGEGGEPSV LPSEECSAME DSLERCLGLI ESCYDSQSVW 60
61 SCVPATIYCN NAQLAPYQRT GRNVYDIRKD CEG
|
|
Region B: Residues: [417-532] |
1 11 21 31 41 51
| | | | | |
1 FLFAGDWMKP YHTAVTDLLN QDLPILVYAG DKDFICNWLG NKAWTDVLPW KYDEEFASQK 60
61 VRNWTASITD EVAGEVKSYK HFTYLRVFNG GHMVPFDVPE NALSMVNEWI HGGFSL
|
| Detection Method: | |
| Confidence: | 10157.0 |
| Match: | 1ysc__ |
| Description: | Serine carboxypeptidase II |
| Matching Structure (courtesy of the PDB): |
|
