| Protein: | ZDS1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 915 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ZDS1.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..915] | [1..915] |
|
|
2.0E-65 | [144..873] | [4..732] |
|
|
2.0E-50 | [314..803] | [3..474] |
|
|
2.0E-50 | [271..830] | [545..1121] |
|
|
1.0E-45 | [324..825] | [535..1025] |
|
Region A: Residues: [1-247] |
1 11 21 31 41 51
| | | | | |
1 MSNRDNESML RTTSSDKAIA SQRDKRKSEV LIAAQSLDNE IRSVKNLKRL SIGSMDLLID 60
61 PELDIKFGGE SSGRRSWSGT TSSSASMPSD TTTVNNTRYS DPTPLENLHG RGNSGIESSN 120
121 KTKQGNYLGI KKGVHSPSRK LNANVLKKNL LWVPANQHPN VKPDNFLELV QDTLQNIQLS 180
181 DNGEDNDGNS NENNDIEDNG EDKESQSYEN KENNTINLNR GLSRHGNASL IRRPSTLRRS 240
241 YTEFDDN
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [248-851] |
1 11 21 31 41 51
| | | | | |
1 EDDDNKGDSA SETVNKVEER ISKIKERPVS LRDITEELTK ISNSAGLTDN DAITLARTLS 60
61 MAGSYSDKKD QPQPEGHYDE GDIGFSTSQA NTLDDGEFAS NMPINNTMTW PERSSLRRSR 120
121 FNTYRIRSQE QEKEVEQSVD EMKNDDEERL KLTKNTIKVE IDPHKSPFRQ QDEDSENMSS 180
181 PGSIGDFQDI YNHYRQSSGE WEQEMGIEKE AEEVPVKVRN DTVEQDLELR EGTTDMVKPS 240
241 ATDDNKETKR HRRRNGWTWL NNKMSREDDN EENQGDDENE ENVDSQRMEL DNSKKHYISL 300
301 FNGGEKTEVS NKEEMNNSST STATSQTRQK IEKTFANLFR RKPHHKHDAS SSPSSSPSSS 360
361 PSIPNNDAVH VRVRKSKKLG NKSGREPVEP IVLRNRPRPH RHHHSRHGSQ KISVKTLKDS 420
421 QPQQQIPLQP QLEGAIEIEK KEESDSESLP QLQPAVSVSS TKSNSRDREE EEAKKKNKKR 480
481 SNTTEISNQQ HSKHVQKENT DEQKAQLQAP AQEQVQTSVP VQASAPVQNS APVQTSAPVE 540
541 ASAQTQAPAA PPLKHTSILP PRKLTFADVK KPDKPNSPVQ FTDSAFGFPL PLLTVSTVIM 600
601 FDHR
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [852-915] |
1 11 21 31 41 51
| | | | | |
1 LPINVERAIY RLSHLKLSNS KRGLREQVLL SNFMYAYLNL VNHTLYMEQV AHDKEQQQQQ 60
61 QQQP
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.511 | a.65.1 | Annexin |
| View | Download | 0.428 | a.16.1 | S15/NS1 RNA-binding domain |
| View | Download | 0.379 | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.412 | a.126.1 | Serum albumin-like |
| View | Download | 0.441 | a.4.9 | Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 |
| View | Download | 0.373 | a.4.1 | Homeodomain-like |
| View | Download | 0.371 | a.17.1 | p8-MTCP1 |
| View | Download | 0.332 | a.161.1 | beta-catenin-interacting protein ICAT |
| View | Download | 0.325 | a.112.1 | Description not found. |
| View | Download | 0.300 | a.57.1 | Protein HNS-dependent expression A; HdeA |
| View | Download | 0.289 | a.179.1 | Replisome organizer (g39p helicase loader/inhibitor protein) |
| View | Download | 0.289 | d.15.7 | Immunoglobulin-binding domains |
| View | Download | 0.267 | a.5.1 | DNA helicase RuvA subunit, C-terminal domain |
| View | Download | 0.261 | a.52.1 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin |
| View | Download | 0.248 | a.12.1 | Kix domain of CBP (creb binding protein) |
| View | Download | 0.236 | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.234 | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.233 | a.30.2 | Homodimeric domain of signal transducing histidine kinase |
| View | Download | 0.230 | a.4.1 | Homeodomain-like |
| View | Download | 0.224 | a.4.1 | Homeodomain-like |
| View | Download | 0.221 | f.30.1 | Photosystem I reaction center subunit X, PsaK |
| View | Download | 0.212 | a.164.1 | C-terminal domain of DFF45/ICAD (DFF-C domain) |
| View | Download | 0.207 | a.23.5 | Hemolysin expression modulating protein HHA |
| View | Download | 0.202 | f.15.1 | Small-conductance potassium channel |
|
Region A: Residues: [460-605] |
1 11 21 31 41 51
| | | | | |
1 EVPVKVRNDT VEQDLELREG TTDMVKPSAT DDNKETKRHR RRNGWTWLNN KMSREDDNEE 60
61 NQGDDENEEN VDSQRMELDN SKKHYISLFN GGEKTEVSNK EEMNNSSTST ATSQTRQKIE 120
121 KTFANLFRRK PHHKHDASSS PSSSPS
|
| Detection Method: | |
| Confidence: | 8.0 |
| Match: | 1w9rA |
| Description: | Solution Structure of Choline Binding Protein A, Domain R2, the Major Adhesin of Streptococcus pneumoniae |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [606-774] |
1 11 21 31 41 51
| | | | | |
1 SSPSIPNNDA VHVRVRKSKK LGNKSGREPV EPIVLRNRPR PHRHHHSRHG SQKISVKTLK 60
61 DSQPQQQIPL QPQLEGAIEI EKKEESDSES LPQLQPAVSV SSTKSNSRDR EEEEAKKKNK 120
121 KRSNTTEISN QQHSKHVQKE NTDEQKAQLQ APAQEQVQTS VPVQASAPV
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [775-837] |
1 11 21 31 41 51
| | | | | |
1 QNSAPVQTSA PVEASAQTQA PAAPPLKHTS ILPPRKLTFA DVKKPDKPNS PVQFTDSAFG 60
61 FPL
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [838-915] |
1 11 21 31 41 51
| | | | | |
1 PLLTVSTVIM FDHRLPINVE RAIYRLSHLK LSNSKRGLRE QVLLSNFMYA YLNLVNHTLY 60
61 MEQVAHDKEQ QQQQQQQP
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.511 | N/A | N/A | a.65.1 | Annexin |
| View | Download | 0.445 | N/A | N/A | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.441 | N/A | N/A | a.4.9 | Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 |
| View | Download | 0.428 | N/A | N/A | a.16.1 | S15/NS1 RNA-binding domain |
| View | Download | 0.412 | N/A | N/A | a.126.1 | Serum albumin-like |
