Protein: | ZDS1 |
Organism: | Saccharomyces cerevisiae |
Length: | 915 amino acids |
Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ZDS1.
Description | E-value | Query Range |
Subject Range |
|
0.0 | [1..915] | [1..915] |
|
2.0E-65 | [144..873] | [4..732] |
|
2.0E-50 | [314..803] | [3..474] |
|
2.0E-50 | [271..830] | [545..1121] |
|
1.0E-45 | [324..825] | [535..1025] |
Region A: Residues: [1-247] |
1 11 21 31 41 51 | | | | | | 1 MSNRDNESML RTTSSDKAIA SQRDKRKSEV LIAAQSLDNE IRSVKNLKRL SIGSMDLLID 60 61 PELDIKFGGE SSGRRSWSGT TSSSASMPSD TTTVNNTRYS DPTPLENLHG RGNSGIESSN 120 121 KTKQGNYLGI KKGVHSPSRK LNANVLKKNL LWVPANQHPN VKPDNFLELV QDTLQNIQLS 180 181 DNGEDNDGNS NENNDIEDNG EDKESQSYEN KENNTINLNR GLSRHGNASL IRRPSTLRRS 240 241 YTEFDDN |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
Region A: Residues: [248-851] |
1 11 21 31 41 51 | | | | | | 1 EDDDNKGDSA SETVNKVEER ISKIKERPVS LRDITEELTK ISNSAGLTDN DAITLARTLS 60 61 MAGSYSDKKD QPQPEGHYDE GDIGFSTSQA NTLDDGEFAS NMPINNTMTW PERSSLRRSR 120 121 FNTYRIRSQE QEKEVEQSVD EMKNDDEERL KLTKNTIKVE IDPHKSPFRQ QDEDSENMSS 180 181 PGSIGDFQDI YNHYRQSSGE WEQEMGIEKE AEEVPVKVRN DTVEQDLELR EGTTDMVKPS 240 241 ATDDNKETKR HRRRNGWTWL NNKMSREDDN EENQGDDENE ENVDSQRMEL DNSKKHYISL 300 301 FNGGEKTEVS NKEEMNNSST STATSQTRQK IEKTFANLFR RKPHHKHDAS SSPSSSPSSS 360 361 PSIPNNDAVH VRVRKSKKLG NKSGREPVEP IVLRNRPRPH RHHHSRHGSQ KISVKTLKDS 420 421 QPQQQIPLQP QLEGAIEIEK KEESDSESLP QLQPAVSVSS TKSNSRDREE EEAKKKNKKR 480 481 SNTTEISNQQ HSKHVQKENT DEQKAQLQAP AQEQVQTSVP VQASAPVQNS APVQTSAPVE 540 541 ASAQTQAPAA PPLKHTSILP PRKLTFADVK KPDKPNSPVQ FTDSAFGFPL PLLTVSTVIM 600 601 FDHR |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
Region A: Residues: [852-915] |
1 11 21 31 41 51 | | | | | | 1 LPINVERAIY RLSHLKLSNS KRGLREQVLL SNFMYAYLNL VNHTLYMEQV AHDKEQQQQQ 60 61 QQQP |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
Region A: Residues: [460-605] |
1 11 21 31 41 51 | | | | | | 1 EVPVKVRNDT VEQDLELREG TTDMVKPSAT DDNKETKRHR RRNGWTWLNN KMSREDDNEE 60 61 NQGDDENEEN VDSQRMELDN SKKHYISLFN GGEKTEVSNK EEMNNSSTST ATSQTRQKIE 120 121 KTFANLFRRK PHHKHDASSS PSSSPS |
Detection Method: | |
Confidence: | 8.0 |
Match: | 1w9rA |
Description: | Solution Structure of Choline Binding Protein A, Domain R2, the Major Adhesin of Streptococcus pneumoniae |
Matching Structure (courtesy of the PDB): |
Region A: Residues: [606-774] |
1 11 21 31 41 51 | | | | | | 1 SSPSIPNNDA VHVRVRKSKK LGNKSGREPV EPIVLRNRPR PHRHHHSRHG SQKISVKTLK 60 61 DSQPQQQIPL QPQLEGAIEI EKKEESDSES LPQLQPAVSV SSTKSNSRDR EEEEAKKKNK 120 121 KRSNTTEISN QQHSKHVQKE NTDEQKAQLQ APAQEQVQTS VPVQASAPV |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
Region A: Residues: [775-837] |
1 11 21 31 41 51 | | | | | | 1 QNSAPVQTSA PVEASAQTQA PAAPPLKHTS ILPPRKLTFA DVKKPDKPNS PVQFTDSAFG 60 61 FPL |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
Region A: Residues: [838-915] |
1 11 21 31 41 51 | | | | | | 1 PLLTVSTVIM FDHRLPINVE RAIYRLSHLK LSNSKRGLRE QVLLSNFMYA YLNLVNHTLY 60 61 MEQVAHDKEQ QQQQQQQP |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.