| Protein: | ZDS1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 915 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ZDS1.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..915] | [1..915] |
|
|
2.0E-65 | [144..873] | [4..732] |
|
|
2.0E-50 | [314..803] | [3..474] |
|
|
2.0E-50 | [271..830] | [545..1121] |
|
|
1.0E-45 | [324..825] | [535..1025] |
|
Region A: Residues: [1-247] |
1 11 21 31 41 51
| | | | | |
1 MSNRDNESML RTTSSDKAIA SQRDKRKSEV LIAAQSLDNE IRSVKNLKRL SIGSMDLLID 60
61 PELDIKFGGE SSGRRSWSGT TSSSASMPSD TTTVNNTRYS DPTPLENLHG RGNSGIESSN 120
121 KTKQGNYLGI KKGVHSPSRK LNANVLKKNL LWVPANQHPN VKPDNFLELV QDTLQNIQLS 180
181 DNGEDNDGNS NENNDIEDNG EDKESQSYEN KENNTINLNR GLSRHGNASL IRRPSTLRRS 240
241 YTEFDDN
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [248-851] |
1 11 21 31 41 51
| | | | | |
1 EDDDNKGDSA SETVNKVEER ISKIKERPVS LRDITEELTK ISNSAGLTDN DAITLARTLS 60
61 MAGSYSDKKD QPQPEGHYDE GDIGFSTSQA NTLDDGEFAS NMPINNTMTW PERSSLRRSR 120
121 FNTYRIRSQE QEKEVEQSVD EMKNDDEERL KLTKNTIKVE IDPHKSPFRQ QDEDSENMSS 180
181 PGSIGDFQDI YNHYRQSSGE WEQEMGIEKE AEEVPVKVRN DTVEQDLELR EGTTDMVKPS 240
241 ATDDNKETKR HRRRNGWTWL NNKMSREDDN EENQGDDENE ENVDSQRMEL DNSKKHYISL 300
301 FNGGEKTEVS NKEEMNNSST STATSQTRQK IEKTFANLFR RKPHHKHDAS SSPSSSPSSS 360
361 PSIPNNDAVH VRVRKSKKLG NKSGREPVEP IVLRNRPRPH RHHHSRHGSQ KISVKTLKDS 420
421 QPQQQIPLQP QLEGAIEIEK KEESDSESLP QLQPAVSVSS TKSNSRDREE EEAKKKNKKR 480
481 SNTTEISNQQ HSKHVQKENT DEQKAQLQAP AQEQVQTSVP VQASAPVQNS APVQTSAPVE 540
541 ASAQTQAPAA PPLKHTSILP PRKLTFADVK KPDKPNSPVQ FTDSAFGFPL PLLTVSTVIM 600
601 FDHR
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [852-915] |
1 11 21 31 41 51
| | | | | |
1 LPINVERAIY RLSHLKLSNS KRGLREQVLL SNFMYAYLNL VNHTLYMEQV AHDKEQQQQQ 60
61 QQQP
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [460-605] |
1 11 21 31 41 51
| | | | | |
1 EVPVKVRNDT VEQDLELREG TTDMVKPSAT DDNKETKRHR RRNGWTWLNN KMSREDDNEE 60
61 NQGDDENEEN VDSQRMELDN SKKHYISLFN GGEKTEVSNK EEMNNSSTST ATSQTRQKIE 120
121 KTFANLFRRK PHHKHDASSS PSSSPS
|
| Detection Method: | |
| Confidence: | 8.0 |
| Match: | 1w9rA |
| Description: | Solution Structure of Choline Binding Protein A, Domain R2, the Major Adhesin of Streptococcus pneumoniae |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [606-774] |
1 11 21 31 41 51
| | | | | |
1 SSPSIPNNDA VHVRVRKSKK LGNKSGREPV EPIVLRNRPR PHRHHHSRHG SQKISVKTLK 60
61 DSQPQQQIPL QPQLEGAIEI EKKEESDSES LPQLQPAVSV SSTKSNSRDR EEEEAKKKNK 120
121 KRSNTTEISN QQHSKHVQKE NTDEQKAQLQ APAQEQVQTS VPVQASAPV
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [775-837] |
1 11 21 31 41 51
| | | | | |
1 QNSAPVQTSA PVEASAQTQA PAAPPLKHTS ILPPRKLTFA DVKKPDKPNS PVQFTDSAFG 60
61 FPL
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [838-915] |
1 11 21 31 41 51
| | | | | |
1 PLLTVSTVIM FDHRLPINVE RAIYRLSHLK LSNSKRGLRE QVLLSNFMYA YLNLVNHTLY 60
61 MEQVAHDKEQ QQQQQQQP
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
