| Protein: | FMP42 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 504 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FMP42.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..504] | [1..504] |
|
|
0.0 | [8..465] | [102..608] |
|
|
0.0 | [8..465] | [12..513] |
|
|
1.0E-29 | [64..209] | [46..190] |
|
|
2.0E-28 | [61..190] | [62..194] |
|
Region A: Residues: [1-211] |
1 11 21 31 41 51
| | | | | |
1 MTSTRTLRYA QVACACIWCL FSAGIIFGFA ALKPILISEG VYHELCDPKD GDRLLCTAQD 60
61 LKLNFIFALS ATVTNIMALP VGKILDMYGP RVCGIIGSCL LFLASGNFIS AKHLVSLWDP 120
121 YLVGYTLLAV AGPFVFISCF QLANSFPQRS GTVLALLTGS FDSSSALFLL YRLLYQNWFP 180
181 TLNVSRFFTL YLIVPVFILA CQLTIMPHSS Y
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
| Term | Confidence | Notes |
| transporter activity | 3.82096685159505 | bayes_pls_golite062009 |
| transmembrane transporter activity | 3.34396155292818 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 3.07161916881404 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 3.00564985710417 | bayes_pls_golite062009 |
| organic acid transmembrane transporter activity | 2.05049771748124 | bayes_pls_golite062009 |
| ion transmembrane transporter activity | 1.75140121218978 | bayes_pls_golite062009 |
| active transmembrane transporter activity | 1.46819549608723 | bayes_pls_golite062009 |
| cation transmembrane transporter activity | 1.34985844043603 | bayes_pls_golite062009 |
| binding | 1.02703439347949 | bayes_pls_golite062009 |
| secondary active transmembrane transporter activity | 0.869150152038001 | bayes_pls_golite062009 |
| polyol transmembrane transporter activity | 0.339747214378126 | bayes_pls_golite062009 |
| alcohol transmembrane transporter activity | 0.339747214378126 | bayes_pls_golite062009 |
| symporter activity | 0.327558013224678 | bayes_pls_golite062009 |
| solute:cation symporter activity | 0.327558013224678 | bayes_pls_golite062009 |
| glycerol transmembrane transporter activity | 0.222664452597504 | bayes_pls_golite062009 |
|
Region A: Residues: [212-282] |
1 11 21 31 41 51
| | | | | |
1 KTVNHIAKIA VEGLDENGRL IEGDTGSGII PDEQERQSLI AIEREEDSIP SRPQRRKSVL 60
61 ETYVEDKLQK K
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [283-504] |
1 11 21 31 41 51
| | | | | |
1 SGGIFGVLHG KSAYEQIKSP WFYLMLLFAL VAMLRINYFI ATVRTQEEYL LNDPDLALKL 60
61 NSIFDMLLPL GGAVSIPFIG LLLDHTDTLS TLTILFTTST AIGVFGLIPN SFTWNLIGIV 120
121 LLVVYRPFYY TVVSDYSSKV FGFDTFGTVY GLLSCICGIF NMSQNLLDKW THTTFNMNPF 180
181 PINLTLVILT VVFSLTLTFY IRSQILPKPV NERGLSSNYQ TI
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
