Protein Overview: FMP42_YEAST

General Information:
Name(s) found:	FMP42_YEAST [Swiss-Prot]
Description(s) found:	Protein FMP42 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=FMP42 PE=1 SV=1 [Swiss-Prot]
Organism:	Saccharomyces cerevisiae S288c
Length:	504 amino acids
Gene Ontology:
Cellular Component:	NONE FOUND
Biological Process:	NONE FOUND
Molecular Function:	NONE FOUND

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTSTRTLRYA QVACACIWCL FSAGIIFGFA ALKPILISEG VYHELCDPKD GDRLLCTAQD  60
   61 LKLNFIFALS ATVTNIMALP VGKILDMYGP RVCGIIGSCL LFLASGNFIS AKHLVSLWDP 120
  121 YLVGYTLLAV AGPFVFISCF QLANSFPQRS GTVLALLTGS FDSSSALFLL YRLLYQNWFP 180
  181 TLNVSRFFTL YLIVPVFILA CQLTIMPHSS YKTVNHIAKI AVEGLDENGR LIEGDTGSGI 240
  241 IPDEQERQSL IAIEREEDSI PSRPQRRKSV LETYVEDKLQ KKSGGIFGVL HGKSAYEQIK 300
  301 SPWFYLMLLF ALVAMLRINY FIATVRTQEE YLLNDPDLAL KLNSIFDMLL PLGGAVSIPF 360
  361 IGLLLDHTDT LSTLTILFTT STAIGVFGLI PNSFTWNLIG IVLLVVYRPF YYTVVSDYSS 420
  421 KVFGFDTFGT VYGLLSCICG IFNMSQNLLD KWTHTTFNMN PFPINLTLVI LTVVFSLTLT 480
  481 FYIRSQILPK PVNERGLSSN YQTI

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

New Feature: Upload Your Own Microscopy Data

No microscopy data found in the PDR for this protein.

Protein Structure Data

[What does the above image mean?]
[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#		Region(s)	Method	Confidence	Match Description
1	View Details	[1..211]	MSA	10.027995	View MSA. No confident structure predictions are available.
2	View Details	[212..282]	deduced	N/A	No confident structure predictions are available.
3	View Details	[283..504]	MSA	1.009939	View MSA. No confident structure predictions are available.

Functions predicted (by domain):

#

Gene Ontology predictions

1

Term	Confidence	Notes
transporter activity	3.82096685159505	bayes_pls_golite062009
transmembrane transporter activity	3.34396155292818	bayes_pls_golite062009
substrate-specific transporter activity	3.07161916881404	bayes_pls_golite062009
substrate-specific transmembrane transporter activity	3.00564985710417	bayes_pls_golite062009
organic acid transmembrane transporter activity	2.05049771748124	bayes_pls_golite062009
ion transmembrane transporter activity	1.75140121218978	bayes_pls_golite062009
active transmembrane transporter activity	1.46819549608723	bayes_pls_golite062009
cation transmembrane transporter activity	1.34985844043603	bayes_pls_golite062009
binding	1.02703439347949	bayes_pls_golite062009
secondary active transmembrane transporter activity	0.869150152038001	bayes_pls_golite062009
polyol transmembrane transporter activity	0.339747214378126	bayes_pls_golite062009
alcohol transmembrane transporter activity	0.339747214378126	bayes_pls_golite062009
symporter activity	0.327558013224678	bayes_pls_golite062009
solute:cation symporter activity	0.327558013224678	bayes_pls_golite062009
glycerol transmembrane transporter activity	0.222664452597504	bayes_pls_golite062009

2

No functions predicted.

3

No functions predicted.

Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

Philius Transmembrane Prediction:

[View Details]

Source: Reynolds et al. 2008. Manuscript submitted

Philius confidence legend

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle