| Protein: | CTL1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 320 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CTL1.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..320] | [1..320] |
|
|
3.0E-67 | [72..304] | [270..508] |
|
|
4.0E-61 | [81..281] | [72..266] |
|
Region A: Residues: [1-57] |
1 11 21 31 41 51
| | | | | |
1 MSDQPETPSN SRNSHENVGA KKADANVASK FRSLHISETT KPLTSTRALY KTTRNNS
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.372 | a.4.1 | Homeodomain-like |
| View | Download | 0.391 | a.30.2 | Homodimeric domain of signal transducing histidine kinase |
| View | Download | 0.269 | a.2.9 | C-terminal UvrC-binding domain of UvrB |
| View | Download | 0.389 | a.2.8 | Eukaryotic DNA topoisomerase I, dispensable insert domain |
| View | Download | 0.233 | d.48.1 | RecA protein, C-terminal domain |
| View | Download | 0.233 | a.60.4 | DNA repair protein Rad51, N-terminal domain |
| View | Download | 0.230 | a.2.1 | GreA transcript cleavage protein, N-terminal domain |
| View | Download | 0.223 | a.30.1 | ROP protein |
| View | Download | 0.218 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.212 | a.4.13 | Sigma3 and sigma4 domains of RNA polymerase sigma factors |
| View | Download | 0.203 | a.76.1 | Iron-dependent represor protein, dimerization domain |
| View | Download | 0.200 | a.144.1 | PABC (PABP) domain |
| Term | Confidence | Notes |
| binding | 1.32114964285132 | bayes_pls_golite062009 |
| catalytic activity | 1.17990683373825 | bayes_pls_golite062009 |
| hydrolase activity | 0.709889322437172 | bayes_pls_golite062009 |
| polynucleotide 5'-phosphatase activity | 0.435579003310852 | bayes_pls_golite062009 |
| protein binding | 0.17471074625109 | bayes_pls_golite062009 |
|
Region A: Residues: [58-320] |
1 11 21 31 41 51
| | | | | |
1 RGATEFHKHV CKLAWKYLAC IDKSSISHIE IEMKFGVITD KRTHRRMTPH NKPFIVQNRN 60
61 GRLVSNVPEQ MFSSFQELLR SKSENPSKCA PRVVKQVQKY TKDSIYNCNN ASKVGKLTSW 120
121 RCSEDLRNKE LKLTYIKKVR VKDFLIRYPQ SSLDAKISIS LEVPEYETSA AFRNGFILQR 180
181 TKSRSTYTFN DKMPLHLDLT KVTTTRRNSH QYTSHEVEVE MDPIFKETIS ANDREKFNEY 240
241 MCSFLNASDL IRKAAERDNM LTT
|
| Detection Method: | |
| Confidence: | 224.67837 |
| Match: | 1d8hA_ |
| Description: | mRNA triphosphatase CET1 |
Matching Structure (courtesy of the PDB): |
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