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Protein Overview: gi|190408404

General Information:
Name(s) found: gi|190408404 [NCBI NR]
Description(s) found:
  • gi|190408404|gb|EDV11669.1| RNA triphosphatase [Saccharomyces cerevisiae RM11-1a] [NCBI NR]
    • Organism: Saccharomyces cerevisiae RM11-1a
    Length: 320 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSDQPETPSN SRNSHENVGA KKADANVASK FRSLHISETT KPLTSTRALY KTTRNNSRGA  60
   61 TEFHKHVCKL AWKYLACIDK SSISHIEIEM KFGVITDKRT HRRMTPHNKP FIVQNRNGRL 120
  121 VSNVPEQMFS SFQELLRSKS ENPSKCAPRV VKQVQKYTKD SIYNCNNASK VGKLTSWRCS 180
  181 EDLRNKELKL TYIKKVRVKD FLIRYPQSSL DAKISISLEV PEYETSAAFR NGFILQRTKS 240
  241 RSTYTFNDKM PLHLDLTKVT TTRRNSHQYT SHEVEVEMDP IFKETISAND REKFNEYMCS 300
  301 FLNASDLIRK AAERDNMLTT

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..57] deduced N/A No confident structure predictions are available.
    2 View Details [58..320] PSI-BLAST 224.67837 mRNA triphosphatase CET1

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  1.32114964285132 bayes_pls_golite062009
  • catalytic activity
    		•  1.17990683373825 bayes_pls_golite062009
  • hydrolase activity
    		•  0.709889322437172 bayes_pls_golite062009
  • polynucleotide 5'-phosphatase activity
    		•  0.435579003310852 bayes_pls_golite062009
  • protein binding
    		•  0.17471074625109 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle