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Protein Overview: pct1

General Information:
Name(s) found: pct1 / SPAC644.04 [Sanger Pombe]
Description(s) found:
Found 17 descriptions.
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  • RNA 5'-triphosphatase [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 303 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article][ISSLink to PubMed article]
    mRNA cap methyltransferase complex [ISSLink to PubMed article]
    Biological Process: mRNA capping [ISSLink to PubMed article]
    dephosphorylation [ICLink to PubMed article]
    Molecular Function: protein homodimerization activity [IDALink to PubMed article]
    protein binding [IPILink to PubMed article]
    polynucleotide 5'-phosphatase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDLKGLLHEE NELPSIEKRK IDENAVEHDK VERKRTKSVA VPKIEMNFLN KPIVPDTTKV  60
   61 ISNFLTHYLI TEPVEHVEIE AKLGTLIDLE TQNRFEFPVM NETILNPEFN LRTRFESDMT 120
  121 ASEHKYLNEF LNQAFRDSQK PGRLPFAYKH TKQVDLFYET EDNSRDKIRV SKNQSDNQVL 180
  181 ACVKKRRVAD LFLYCPNDAF DIRISISDEL PVSMPSGNQQ PSLTRLKDRV GYVHQEIKID 240
  241 LTKTTQNDPV YDTTERHELE VEFGNIADLR DRAQKAKDGM EAPLFRRVQL FMDNVRILRR 300
  301 EHS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..303] PSI-BLAST 83.09691 mRNA triphosphatase CET1

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • polynucleotide 5'-phosphatase activity
    		•  11.2864202061301 bayes_pls_golite062009
  • nucleotide phosphatase activity
    		•  5.10806075014632 bayes_pls_golite062009
  • binding
    		•  1.32114964285132 bayes_pls_golite062009
  • catalytic activity
    		•  1.17990683373825 bayes_pls_golite062009
  • hydrolase activity
    		•  0.487109994827608 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle