| Protein: | NAM7 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 971 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for NAM7.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..971] | [1..971] |
|
|
0.0 | [12..878] | [84..942] |
|
|
0.0 | [12..878] | [79..937] |
|
|
0.0 | [35..865] | [73..909] |
|
|
0.0 | [12..878] | [65..920] |
|
|
0.0 | [26..924] | [14..933] |
|
Region A: Residues: [1-224] |
1 11 21 31 41 51
| | | | | |
1 MVGSGSHTPY DISNSPSDVN VQPATQLNST LVEDDDVDNQ LFEEAQVTET GFRSPSASDN 60
61 SCAYCGIDSA KCVIKCNSCK KWFCNTKNGT SSSHIVNHLV LSHHNVVSLH PDSDLGDTVL 120
121 ECYNCGRKNV FLLGFVSAKS EAVVVLLCRI PCAQTKNANW DTDQWQPLIE DRQLLSWVAE 180
181 QPTEEEKLKA RLITPSQISK LEAKWRSNKD ATINDIDAPE EQEA
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [225-389] |
1 11 21 31 41 51
| | | | | |
1 IPPLLLRYQD AYEYQRSYGP LIKLEADYDK QLKESQALEH ISVSWSLALN NRHLASFTLS 60
61 TFESNELKVA IGDEMILWYS GMQHPDWEGR GYIVRLPNSF QDTFTLELKP SKTPPPTHLT 120
121 TGFTAEFIWK GTSYDRMQDA LKKFAIDKKS ISGYLYYKIL GHQVV
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [390-638] |
1 11 21 31 41 51
| | | | | |
1 DISFDVPLPK EFSIPNFAQL NSSQSNAVSH VLQRPLSLIQ GPPGTGKTVT SATIVYHLSK 60
61 IHKDRILVCA PSNVAVDHLA AKLRDLGLKV VRLTAKSRED VESSVSNLAL HNLVGRGAKG 120
121 ELKNLLKLKD EVGELSASDT KRFVKLVRKT EAEILNKADV VCCTCVGAGD KRLDTKFRTV 180
181 LIDESTQASE PECLIPIVKG AKQVILVGDH QQLGPVILER KAADAGLKQS LFERLISLGH 240
241 VPIRLEVQY
|
| Detection Method: | |
| Confidence: | 89.0 |
| Match: | 1pjr__ |
| Description: | DEXX box DNA helicase |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [639-971] |
1 11 21 31 41 51
| | | | | |
1 RMNPYLSEFP SNMFYEGSLQ NGVTIEQRTV PNSKFPWPIR GIPMMFWANY GREEISANGT 60
61 SFLNRIEAMN CERIITKLFR DGVKPEQIGV ITPYEGQRAY ILQYMQMNGS LDKDLYIKVE 120
121 VASVDAFQGR EKDYIILSCV RANEQQAIGF LRDPRRLNVG LTRAKYGLVI LGNPRSLARN 180
181 TLWNHLLIHF REKGCLVEGT LDNLQLCTVQ LVRPQPRKTE RPMNAQFNVE SEMGDFPKFQ 240
241 DFDAQSMVSF SGQIGDFGNA FVDNTELSSY INNEYWNFEN FKSAFSQKQN RNEIDDRNLY 300
301 QEEASHLNSN FARELQREEQ KHELSKDFSN LGI
|
| Detection Method: | |
| Confidence: | 89.0 |
| Match: | 1pjr__ |
| Description: | DEXX box DNA helicase |
| Matching Structure (courtesy of the PDB): |
|
