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Protein Overview: gi|3328175, gi|1...

General Information:
Name(s) found: gi|3328175 [NCBI NR]
gi|2739355 [NCBI NR]
gi|24981038 [NCBI NR]
gi|18375673 [NCBI NR]
gi|119605148 [NCBI NR]
gi|119605146 [NCBI NR]
gi|119605145 [NCBI NR]
Description(s) found:
Found 30 descriptions.
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  • gi|3328175|gb|AAC26788.1| nonsense-mediated mRNA decay trans-acting factor [Homo sapiens] [NCBI NR]
  • gi|2739355|gb|AAB94785.1| pNORF1 [Homo sapiens] [NCBI NR]
  • gi|24981038|gb|AAH39817.1| UPF1 regulator of nonsense transcripts homolog (yeast) [Homo sapiens] [NCBI NR]
  • gi|18375673|ref|NP_002902.2| regulator of nonsense transcripts 1 [Homo sapiens] [NCBI NR]
  • gi|119605148|gb|EAW84742.1| UPF1 regulator of nonsense transcripts homolog (yeast), isoform CRA_b [Homo sapiens] [NCBI NR]
  • gi|119605146|gb|EAW84740.1| UPF1 regulator of nonsense transcripts homolog (yeast), isoform CRA_b [Homo sapiens] [NCBI NR]
  • gi|119605145|gb|EAW84739.1| UPF1 regulator of nonsense transcripts homolog (yeast), isoform CRA_b [Homo sapiens] [NCBI NR]
    • Organism: Homo sapiens
    Length: 1118 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSVEAYGPSS QTLTFLDTEE AELLGADTQG SEFEFTDFTL PSQTQTPPGG PGGPGGGGAG  60
   61 GPGGAGAGAA AGQLDAQVGP EGILQNGAVD DSVAKTSQLL AELNFEEDEE DTYYTKDLPI 120
  121 HACSYCGIHD PACVVYCNTS KKWFCNGRGN TSGSHIVNHL VRAKCKEVTL HKDGPLGETV 180
  181 LECYNCGCRN VFLLGFIPAK ADSVVVLLCR QPCASQSSLK DINWDSSQWQ PLIQDRCFLS 240
  241 WLVKIPSEQE QLRARQITAQ QINKLEELWK ENPSATLEDL EKPGVDEEPQ HVLLRYEDAY 300
  301 QYQNIFGPLV KLEADYDKKL KESQTQDNIT VRWDLGLNKK RIAYFTLPKT DSDMRLMQGD 360
  361 EICLRYKGDL APLWKGIGHV IKVPDNYGDE IAIELRSSVG APVEVTHNFQ VDFVWKSTSF 420
  421 DRMQSALKTF AVDETSVSGY IYHKLLGHEV EDVIIKCQLP KRFTAQGLPD LNHSQVYAVK 480
  481 TVLQRPLSLI QGPPGTGKTV TSATIVYHLA RQGNGPVLVC APSNIAVDQL TEKIHQTGLK 540
  541 VVRLCAKSRE AIDSPVSFLA LHNQIRNMDS MPELQKLQQL KDETGELSSA DEKRYRALKR 600
  601 TAERELLMNA DVICCTCVGA GDPRLAKMQF RSILIDESTQ ATEPECMVPV VLGAKQLILV 660
  661 GDHCQLGPVV MCKKAAKAGL SQSLFERLVV LGIRPIRLQV QYRMHPALSA FPSNIFYEGS 720
  721 LQNGVTAADR VKKGFDFQWP QPDKPMFFYV TQGQEEIASS GTSYLNRTEA ANVEKITTKL 780
  781 LKAGAKPDQI GIITPYEGQR SYLVQYMQFS GSLHTKLYQE VEIASVDAFQ GREKDFIILS 840
  841 CVRANEHQGI GFLNDPRRLN VALTRARYGV IIVGNPKALS KQPLWNHLLN YYKEQKVLVE 900
  901 GPLNNLRESL MQFSKPRKLV NTINPGARFM TTAMYDAREA IIPGSVYDRS SQGRPSSMYF 960
  961 QTHDQIGMIS AGPSHVAAMN IPIPFNLVMP PMPPPGYFGQ ANGPAAGRGT PKGKTGRGGR1020
 1021 QKNRFGLPGP SQTNLPNSQA SQDVASQPFS QGALTQGYIS MSQPSQMSQP GLSQPELSQD1080
 1081 SYLGDEFKSQ IDVALSQDST YQGERAYQHG GVTGLSQY

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..73] deduced N/A No confident structure predictions are available.
    2 View Details [74..269] PSI-BLAST 88.045757 No description for 2iykA was found.
    3 View Details [270..936] PSI-BLAST 176.0 No description for 2gjkA was found.
    4 View Details [937..1118] PSI-BLAST 20.221849 No description for 1y0fB was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle