| Protein: | PDS5 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 1277 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PDS5.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..1277] | [1..1277] |
|
|
0.0 | [8..1271] | [12..1227] |
|
|
0.0 | [5..1251] | [23..1327] |
|
|
0.0 | [4..1211] | [23..1336] |
|
|
0.0 | [17..1165] | [7..1145] |
|
|
0.0 | [6..1196] | [1..1128] |
|
Region A: Residues: [1-698] |
1 11 21 31 41 51
| | | | | |
1 MAKGAVTKLK FNSPIISTSD QLISTNELLD RLKALHEELA SLDQDNTDLT GLDKYRDALV 60
61 SRKLLKHKDV GIRAFTACCL SDILRLYAPD APYTDAQLTD IFKLVLSQFE QLGDQENGYH 120
121 IQQTYLITKL LEYRSIVLLA DLPSSNNLLI ELFHIFYDPN KSFPARLFNV IGGILGEVIS 180
181 EFDSVPLEVL RLIFNKFLTY NPNEIPEGLN VTSDCGYEVS LILCDTYSNR MSRHLTKYYS 240
241 EIIHEATNDD NNSRLLTVVV KLHKLVLRLW ETVPELINAV IGFIYHELSS ENELFRKEAT 300
301 KLIGQILTSY SDLNFVSTHS DTFKAWISKI ADISPDVRVE WTESIPQIIA TREDISKELN 360
361 QALAKTFIDS DPRVRRTSVM IFNKVPVTEI WKNITNKAIY TSLLHLAREK HKEVRELCIN 420
421 TMAKFYSNSL NEIERTYQNK EIWEIIDTIP STLYNLYYIN DLNINEQVDS VIFEYLLPFE 480
481 PDNDKRVHRL LTVLSHFDKK AFTSFFAFNA RQIKISFAIS KYIDFSKFLN NQESMSSSQG 540
541 PIVMNKYNQT LQWLASGLSD STKAIDALET IKQFNDERIF YLLNACVTND IPFLTFKNCY 600
601 NELVSKLQTP GLFKKYNIST GASIMPRDIA KVIQILLFRA SPIIYNVSNI SVLLNLSNNS 660
661 DAKQLDLKRR ILDDISKVNP TLFKDQIRTL KTIIKDLD
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [699-840] |
1 11 21 31 41 51
| | | | | |
1 DPDAEKNDNL SLEEALKTLY KASKTLKDQV DFDDTFFFTK LYDFAVESKP EITKYATKLI 60
61 ALSPKAEETL KKIKIRILPL DLQKDKYFTS HIIVLMEIFK KFPHVLNDDS TDIISYLIKE 120
121 VLLSNQVVGD SKKEIDWVED SL
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [841-1196] |
1 11 21 31 41 51
| | | | | |
1 LSDTKYSAIG NKVFTLKLFT NKLRSIAPDV PRDELAESFT EKTMKLFFYL IASGGELISE 60
61 FNKEFYPTPS NYQTKLRCVA GIQVLKLARI SNLNNFIKPS DIIKLINLVE DESLPVRKTF 120
121 LEQLKDYVAN ELISIKFLPL VFFTAYEPDV ELKTTTKIWI NFTFGLKSFK KGTIFERALP 180
181 RLIHAIAHHP DIVGGLDSEG DAYLNALTTA IDYLLFYFDS IAAQENFSLL YYLSERVKNY 240
241 QDKLVEDEID EEEGPQKEEA PKKHRPYGQK MYIIGELSQM ILLNLKEKKN WQHSAYPGKL 300
301 NLPSDLFKPF ATVQEAQLSF KTYIPESLTE KIQNNIKAKI GRILHTSQTQ RQRLQK
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1197-1277] |
1 11 21 31 41 51
| | | | | |
1 RLLAHENNES QKKKKKVHHA RSQADDEEGD GDRESDSDDD SYSPSNKNET KKGHENIVMK 60
61 KLRVRKEVDY KDDEDDDIEM T
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
