| Protein: | WAR1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 944 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for WAR1.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..944] | [1..944] |
|
Region A: Residues: [1-944] |
1 11 21 31 41 51
| | | | | |
1 MDTQIAITGV AVGKEINNDN SKTDQKVSLP KADVPCIDKA TQTIIEGCSK DDPRLSYPTK 60
61 LETTEKGKTK RNSFACVCCH SLKQKCEPSD VNDIYRKPCR RCLKHKKLCK FDLSKRTRKR 120
121 KPRSRSPTPF ESPMVNVSTK SKGPTDSEES SLKDGTSYLA SFPSDPNAKQ FPNSRTVLPG 180
181 LQQSLSDLWS TLSQPPSYGA REAETTSTGE ITTNNHTKSN GSVPTNPAVL ASNDEHTNIS 240
241 DAPVIYSTYN SPVPISSAPT SINSEALFKH RPKIVGDEET QNVKVKRQKK SYSRHMTRSF 300
301 RKQLQSLIIS QKGKIRDISM KLDTWSKQWN DLVEKSMFLP TIADPVSVGI ISHEEATLRL 360
361 HLYKTEISYL SKLPFIKVEE NVSVDELRKK KPILFSVIMS CVSIVLTPKQ TTRGTIMKLD 420
421 SFVLNLITNQ IFKANNKSIE IIESLSTLCL WYNFFEWSSK TRYHIFNYIC CCLTRDLGPT 480
481 YVNRSFGMFS DEDPKRFKSP LELYSNGASL TLLVYISALN ISIFLRQSIQ ARWSHVTEKA 540
541 CEDLVKETKK SRHYDNDKLL LDSADDPILV QFAKMNHVLE NIHTHLHERD LNDDEFDDPI 600
601 FTKKYLNKLM EKYHKQLQEI FTKLDRNRPR VIAFYYSVEA YLYQYKLAVF IGEMSHTINE 660
661 KVELPREIMD DFVKCYHCCK SALEEFSKLE PILITSLPLF HTSRIIYTVG MLLLKLRYSV 720
721 VAIPSFHDLM PLTDDAIALV IGVNNLLEKT SELYPFNNSL YKFRYVIALF CQTYANKVID 780
781 VADRYNAERE KLKEKQVIDE VSNGHDGTKP INAYVTESQK MPTEEDPIID NNTNQNITAV 840
841 PDEMLPVYSR VRDDTAAMNL NINSTSYMNE SPHEHRESMT GTTLLPPPFI SNDVTNSADS 900
901 TNIKPSPSSS VDNLNDYLTD INSLAWGVNS LNDEFWTDLF MNDI
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
| Term | Confidence | Notes |
| binding | 2.27420313576729 | bayes_pls_golite062009 |
| DNA binding | 1.50550824160136 | bayes_pls_golite062009 |
| nucleic acid binding | 1.36927476163231 | bayes_pls_golite062009 |
| transcription regulator activity | 0.984919611784138 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 0.0635960882168476 | bayes_pls_golite062009 |
|
Region A: Residues: [207-338] |
1 11 21 31 41 51
| | | | | |
1 STGEITTNNH TKSNGSVPTN PAVLASNDEH TNISDAPVIY STYNSPVPIS SAPTSINSEA 60
61 LFKHRPKIVG DEETQNVKVK RQKKSYSRHM TRSFRKQLQS LIISQKGKIR DISMKLDTWS 120
121 KQWNDLVEKS MF
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [339-555] |
1 11 21 31 41 51
| | | | | |
1 LPTIADPVSV GIISHEEATL RLHLYKTEIS YLSKLPFIKV EENVSVDELR KKKPILFSVI 60
61 MSCVSIVLTP KQTTRGTIMK LDSFVLNLIT NQIFKANNKS IEIIESLSTL CLWYNFFEWS 120
121 SKTRYHIFNY ICCCLTRDLG PTYVNRSFGM FSDEDPKRFK SPLELYSNGA SLTLLVYISA 180
181 LNISIFLRQS IQARWSHVTE KACEDLVKET KKSRHYD
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [556-732] |
1 11 21 31 41 51
| | | | | |
1 NDKLLLDSAD DPILVQFAKM NHVLENIHTH LHERDLNDDE FDDPIFTKKY LNKLMEKYHK 60
61 QLQEIFTKLD RNRPRVIAFY YSVEAYLYQY KLAVFIGEMS HTINEKVELP REIMDDFVKC 120
121 YHCCKSALEE FSKLEPILIT SLPLFHTSRI IYTVGMLLLK LRYSVVAIPS FHDLMPL
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [733-833] |
1 11 21 31 41 51
| | | | | |
1 TDDAIALVIG VNNLLEKTSE LYPFNNSLYK FRYVIALFCQ TYANKVIDVA DRYNAEREKL 60
61 KEKQVIDEVS NGHDGTKPIN AYVTESQKMP TEEDPIIDNN T
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [834-944] |
1 11 21 31 41 51
| | | | | |
1 NQNITAVPDE MLPVYSRVRD DTAAMNLNIN STSYMNESPH EHRESMTGTT LLPPPFISND 60
61 VTNSADSTNI KPSPSSSVDN LNDYLTDINS LAWGVNSLND EFWTDLFMND I
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
