| Protein: | SRC1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 834 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SRC1.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..834] | [1..834] |
|
|
0.0 | [7..819] | [6..836] |
|
|
2.0E-56 | [619..818] | [1..199] |
|
|
5.0E-46 | [15..449] | [1339..1808] |
|
|
8.0E-44 | [679..820] | [610..750] |
|
Region A: Residues: [1-149] |
1 11 21 31 41 51
| | | | | |
1 MNSDLEYLED GFDPNSMKVA TLRRILVENN VDFPSNARKN ALVGLFDEKV KPQIPQLRKM 60
61 YLNVRPSDEG IVKMDRPSSS PSIASPRRSR RARREKSASP MAKQFKKNRI LDDVSNDDDD 120
121 DDDDDDDNDK KDDPLIVPSG TDTDEVDDE
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [150-436] |
1 11 21 31 41 51
| | | | | |
1 EDDVITSSSN KSDTNDFQQN SDTRKKRKDP DSDDWSESNS KENKIDNKHL NLLSSDSEIE 60
61 QDYQKAKKRK TSDLNQEHGN GSAILGKLSV KTPIKNTNRK PVSMDNFNDS LTSSGTENDP 120
121 FVPNIRHNPK ELGTANGTGH STPLSKLKVS ASFADKLPQK EVPSTILVPE VEQQEPSQSE 180
181 RTPSLFSSEG SGSESEAPLL PEITTPGPHQ PMGNTSNNVV EMIDTDSSNL VSDEDEVLVP 240
241 TRIETPQLPT EKDVEKCEAR VQELQEEVNE QLEHENGSEF DVKQGSG
|
| Detection Method: | |
| Confidence: | 7.17 |
| Match: | 1iu4A |
| Description: | Microbial transglutaminase |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [437-678] |
1 11 21 31 41 51
| | | | | |
1 KVGNRHKFKR ALKFLSKSLL ALFLFCIFIV IPLLFGLWYR EQRLLIGYCG HEVPSHRVSG 60
61 NSFEFIQKLD NLLQDYRPKC IPCPPNGICY PYLKLKCKPD YKLAPSRLDF LEIIPAQGKC 120
121 VKDDKKQQLV SEVVEKSLEF LRAKNAQISC GDGKDDIESG MTEDALYQIF NEARAPWIRD 180
181 DEFEDLWIQV IKDLTEEPEI LWRQLSPTDN NIGGNSNNII KTNDVPRQKR HLPEKFISKT 240
241 RN
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [679-834] |
1 11 21 31 41 51
| | | | | |
1 FRSTSKKYIG MKCRFEREIY QTYKKFQRPI WLMFLLIVIS KVIEIKLKNY YRKKARIEEL 60
61 VTQTMEKLKF QKIKSMSDPK ENAYLSIVQL RDIFLSDIVD LKYKNQLWSE VVKYLEHNNS 120
121 NIKSNLTEIR GEIMKCWEWI GPMELNEPKD SAENKI
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.800 | N/A | N/A | a.7.1 | Spectrin repeat |
