| Protein: | SRC1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 834 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SRC1.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..834] | [1..834] |
|
|
0.0 | [7..819] | [6..836] |
|
|
2.0E-56 | [619..818] | [1..199] |
|
|
5.0E-46 | [15..449] | [1339..1808] |
|
|
8.0E-44 | [679..820] | [610..750] |
|
Region A: Residues: [1-149] |
1 11 21 31 41 51
| | | | | |
1 MNSDLEYLED GFDPNSMKVA TLRRILVENN VDFPSNARKN ALVGLFDEKV KPQIPQLRKM 60
61 YLNVRPSDEG IVKMDRPSSS PSIASPRRSR RARREKSASP MAKQFKKNRI LDDVSNDDDD 120
121 DDDDDDDNDK KDDPLIVPSG TDTDEVDDE
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [150-436] |
1 11 21 31 41 51
| | | | | |
1 EDDVITSSSN KSDTNDFQQN SDTRKKRKDP DSDDWSESNS KENKIDNKHL NLLSSDSEIE 60
61 QDYQKAKKRK TSDLNQEHGN GSAILGKLSV KTPIKNTNRK PVSMDNFNDS LTSSGTENDP 120
121 FVPNIRHNPK ELGTANGTGH STPLSKLKVS ASFADKLPQK EVPSTILVPE VEQQEPSQSE 180
181 RTPSLFSSEG SGSESEAPLL PEITTPGPHQ PMGNTSNNVV EMIDTDSSNL VSDEDEVLVP 240
241 TRIETPQLPT EKDVEKCEAR VQELQEEVNE QLEHENGSEF DVKQGSG
|
| Detection Method: | |
| Confidence: | 7.17 |
| Match: | 1iu4A |
| Description: | Microbial transglutaminase |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [437-678] |
1 11 21 31 41 51
| | | | | |
1 KVGNRHKFKR ALKFLSKSLL ALFLFCIFIV IPLLFGLWYR EQRLLIGYCG HEVPSHRVSG 60
61 NSFEFIQKLD NLLQDYRPKC IPCPPNGICY PYLKLKCKPD YKLAPSRLDF LEIIPAQGKC 120
121 VKDDKKQQLV SEVVEKSLEF LRAKNAQISC GDGKDDIESG MTEDALYQIF NEARAPWIRD 180
181 DEFEDLWIQV IKDLTEEPEI LWRQLSPTDN NIGGNSNNII KTNDVPRQKR HLPEKFISKT 240
241 RN
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [679-834] |
1 11 21 31 41 51
| | | | | |
1 FRSTSKKYIG MKCRFEREIY QTYKKFQRPI WLMFLLIVIS KVIEIKLKNY YRKKARIEEL 60
61 VTQTMEKLKF QKIKSMSDPK ENAYLSIVQL RDIFLSDIVD LKYKNQLWSE VVKYLEHNNS 120
121 NIKSNLTEIR GEIMKCWEWI GPMELNEPKD SAENKI
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.800 | N/A | N/A | a.7.1 | Spectrin repeat |
| View | Download | 0.661 | N/A | N/A | a.7.1 | Spectrin repeat |
| View | Download | 0.644 | N/A | N/A | a.7.4 | Smac/diablo |
| View | Download | 0.609 | N/A | N/A | a.24.17 | Group V grass pollen allergen |
| View | Download | 0.591 | N/A | N/A | c.58.1 | Aminoacid dehydrogenase-like, N-terminal domain |
| View | Download | 0.571 | N/A | N/A | a.1.1 | Globin-like |
| View | Download | 0.560 | N/A | N/A | a.22.1 | Histone-fold |
| View | Download | 0.550 | N/A | N/A | a.24.4 | Hemerythrin |
| View | Download | 0.525 | N/A | N/A | a.63.1 | Apolipophorin-III |
| View | Download | 0.518 | N/A | N/A | f.1.1 | Colicin |
| View | Download | 0.480 | N/A | N/A | d.19.1 | MHC antigen-recognition domain |
| View | Download | 0.457 | N/A | N/A | a.90.1 | Transcription factor STAT-4 N-domain |
| View | Download | 0.450 | N/A | N/A | a.74.1 | Cyclin-like |
| View | Download | 0.437 | N/A | N/A | a.59.1 | PAH2 domain |
| View | Download | 0.437 | N/A | N/A | d.38.1 | Thioesterase/thiol ester dehydrase-isomerase |
| View | Download | 0.436 | N/A | N/A | c.95.1 | Thiolase-like |
| View | Download | 0.432 | N/A | N/A | a.78.1 | Fatty acid responsive transcription factor FadR, C-terminal domain |
| View | Download | 0.429 | N/A | N/A | c.2.1 | NAD(P)-binding Rossmann-fold domains |
| View | Download | 0.417 | N/A | N/A | d.221.1 | Nuclease A inhibitor (NuiA) |
| View | Download | 0.408 | N/A | N/A | a.182.1 | GatB/YqeY domain |
| View | Download | 0.401 | N/A | N/A | d.58.26 | GHMP Kinase, C-terminal domain |
| View | Download | 0.401 | N/A | N/A | a.118.12 | Ran-GTPase activating protein 1 (RanGAP1), C-terminal domain |
| View | Download | 0.399 | N/A | N/A | c.1.17 | Quinolinic acid phosphoribosyltransferase (Nicotinate-nucleotide pyrophosphorylase, NadC), C-terminal domain |
| View | Download | 0.397 | N/A | N/A | c.37.1 | P-loop containing nucleoside triphosphate hydrolases |
| View | Download | 0.395 | N/A | N/A | f.35.1 | Multidrug efflux transporter AcrB transmembrane domain |
| View | Download | 0.394 | N/A | N/A | d.43.1 | Elongation factor Ts (EF-Ts), dimerisation domain |
| View | Download | 0.387 | N/A | N/A | a.77.1 | DEATH domain |
| View | Download | 0.386 | N/A | N/A | a.62.1 | Hepatitis B viral capsid (hbcag) |
| View | Download | 0.385 | N/A | N/A | a.126.1 | Serum albumin-like |
| View | Download | 0.384 | N/A | N/A | a.1.1 | Globin-like |
| View | Download | 0.382 | N/A | N/A | d.24.1 | Pili subunits |
| View | Download | 0.376 | N/A | N/A | a.26.1 | 4-helical cytokines |
| View | Download | 0.376 | N/A | N/A | b.26.1 | SMAD/FHA domain |
| View | Download | 0.366 | N/A | N/A | f.1.4 | Bcl-2 inhibitors of programmed cell death |
| View | Download | 0.361 | N/A | N/A | c.37.1 | P-loop containing nucleoside triphosphate hydrolases |
| View | Download | 0.353 | N/A | N/A | a.60.10 | Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain |
| View | Download | 0.352 | N/A | N/A | a.19.1 | Fertilization protein |
| View | Download | 0.351 | N/A | N/A | a.48.2 | Transferrin receptor ectodomain, C-terminal domain |
| View | Download | 0.345 | N/A | N/A | a.118.1 | ARM repeat |
| View | Download | 0.344 | N/A | N/A | a.26.1 | 4-helical cytokines |
| View | Download | 0.343 | N/A | N/A | d.129.3 | Bet v1-like |
| View | Download | 0.335 | N/A | N/A | c.23.1 | CheY-like |
| View | Download | 0.333 | N/A | N/A | d.109.1 | Actin depolymerizing proteins |
| View | Download | 0.331 | N/A | N/A | e.37.1 | Bifunctional dehydrogenase/ferrochelatase Met8p, dimerisation and C-terminal domains |
| View | Download | 0.328 | N/A | N/A | a.1.1 | Globin-like |
| View | Download | 0.326 | N/A | N/A | a.2.7 | tRNA-binding arm |
| View | Download | 0.324 | N/A | N/A | c.108.1 | HAD-like |
| View | Download | 0.323 | N/A | N/A | d.81.1 | Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain |
| View | Download | 0.322 | N/A | N/A | a.111.1 | Acid phosphatase/Vanadium-dependent haloperoxidase |
| View | Download | 0.301 | N/A | N/A | c.28.1 | Cryptochrome/photolyase, N-terminal domain |
| View | Download | 0.300 | N/A | N/A | a.39.2 | Insect pheromon/odorant-binding proteins |
| View | Download | 0.299 | N/A | N/A | a.79.1 | Antitermination factor NusB |
| View | Download | 0.298 | N/A | N/A | d.208.1 | MTH1598-like |
| View | Download | 0.293 | N/A | N/A | a.118.9 | ENTH/VHS domain |
| View | Download | 0.292 | N/A | N/A | c.2.1 | NAD(P)-binding Rossmann-fold domains |
| View | Download | 0.291 | N/A | N/A | a.47.2 | t-snare proteins |
| View | Download | 0.289 | N/A | N/A | a.47.2 | t-snare proteins |
| View | Download | 0.286 | N/A | N/A | f.36.1 | Neurotransmitter-gated ion-channel pransmembrane pore |
| View | Download | 0.282 | N/A | N/A | a.25.1 | Ferritin-like |
| View | Download | 0.281 | N/A | N/A | a.2.5 | Prefoldin |
| View | Download | 0.277 | N/A | N/A | a.29.2 | Bromodomain |
| View | Download | 0.276 | N/A | N/A | d.58.31 | Methyl-coenzyme M reductase subunits |
| View | Download | 0.275 | N/A | N/A | a.118.8 | TPR-like |
| View | Download | 0.262 | N/A | N/A | b.111.1 | Small protein B (SmpB) |
| View | Download | 0.258 | N/A | N/A | a.118.11 | Cytochrome c oxidase subunit E |
| View | Download | 0.256 | N/A | N/A | f.35.1 | Multidrug efflux transporter AcrB transmembrane domain |
| View | Download | 0.253 | N/A | N/A | d.58.26 | GHMP Kinase, C-terminal domain |
| View | Download | 0.252 | N/A | N/A | d.131.1 | DNA clamp |
| View | Download | 0.247 | N/A | N/A | a.133.1 | Phospholipase A2, PLA2 |
| View | Download | 0.246 | N/A | N/A | a.47.1 | STAT |
| View | Download | 0.239 | N/A | N/A | d.110.4 | SNARE-like |
| View | Download | 0.235 | N/A | N/A | f.1.4 | Bcl-2 inhibitors of programmed cell death |
| View | Download | 0.233 | N/A | N/A | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.231 | N/A | N/A | a.87.1 | DBL homology domain (DH-domain) |
| View | Download | 0.230 | N/A | N/A | a.123.1 | Nuclear receptor ligand-binding domain |
| View | Download | 0.221 | N/A | N/A | a.100.1 | 6-phosphogluconate dehydrogenase C-terminal domain-like |
| View | Download | 0.221 | N/A | N/A | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.220 | N/A | N/A | a.41.1 | Domain of poly(ADP-ribose) polymerase |
| View | Download | 0.220 | N/A | N/A | d.58.19 | Bacterial exopeptidase dimerisation domain |
| View | Download | 0.218 | N/A | N/A | a.74.1 | Cyclin-like |
| View | Download | 0.217 | N/A | N/A | a.7.5 | Tubulin chaperone cofactor A |
| View | Download | 0.217 | N/A | N/A | a.5.4 | Elongation factor TFIIS domain 2 |
| View | Download | 0.214 | N/A | N/A | a.91.1 | Regulator of G-protein signalling, RGS |
| View | Download | 0.211 | N/A | N/A | d.153.1 | N-terminal nucleophile aminohydrolases (Ntn hydrolases) |
| View | Download | 0.211 | N/A | N/A | f.32.1 | a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) |
| View | Download | 0.209 | N/A | N/A | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.207 | N/A | N/A | a.39.1 | EF-hand |
| View | Download | 0.207 | N/A | N/A | f.36.1 | Neurotransmitter-gated ion-channel pransmembrane pore |
| View | Download | 0.202 | N/A | N/A | d.52.2 | GMP synthetase C-terminal dimerisation domain |
| View | Download | 0.202 | N/A | N/A | a.74.1 | Cyclin-like |
| View | Download | 0.202 | N/A | N/A | a.69.2 | Ypt/Rab-GAP domain of gyp1p |
