| Protein: | CRN1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 651 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CRN1.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..651] | [1..651] |
|
|
0.0 | [3..504] | [919..1430] |
|
|
0.0 | [2..508] | [843..1317] |
|
Region A: Residues: [1-70] |
1 11 21 31 41 51
| | | | | |
1 MSGKFVRASK YRHVFGQAAK KELQYEKLKV TNNAWDSNLL KTNGKFIAVN WNASGGGAFA 60
61 VIPIEEVGKA
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [71-390] |
1 11 21 31 41 51
| | | | | |
1 PDQVPLFRGH TAQVLDTDFD PFNDHRIASG SDDSKIGIWD IPENYKFHDH VDEDGEPIDI 60
61 KPVKFLTGHA RKVGHVLYHP VAENVLASSS GDYTVKLWNV ETGKDMITLK HPDMVTSMSF 120
121 SYDGNYLATV ARDKKLRVWN IREEKIVSEG PAHTGAKNQR VVWLGNSDRL ATTGFSKLSD 180
181 RQIGIWDAFN IEKGDLGGFY TVDQSSGILM PFYDEGNKIL YLVGKGDGNI RYYEFQNDEL 240
241 FELSEFQSTE AQRGFAVAPK RMVNVKENEV LKGFKTVVDQ RIEPVSFFVP RRSEEFQEDI 300
301 YPDAPSNKPA LTAEEWFSGK
|
| Detection Method: | |
| Confidence: | 175.28043 |
| Match: | 1erjA_ |
| Description: | Tup1, C-terminal domain |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [391-466] |
1 11 21 31 41 51
| | | | | |
1 SVEGPILVSM RSIYDGSAPS FHEAKRPQQP TTQETALEEK KEQPKVEKPI SESEKEVKQE 60
61 APKSPSPLKS ASSSST
|
| Detection Method: | |
| Confidence: | 30.69897 |
| Match: | 1gxrA_ |
| Description: | Groucho/tle1, C-terminal domain |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [467-651] |
1 11 21 31 41 51
| | | | | |
1 INHVLKEDNS INKLLKKSSD IDQVNNAEDP SRDTSGWEEA DDEPAPIKIE TPVTPTETKK 60
61 DRTPKVEPSK ELKPEPVSIA TDRKQEQSLP QEEKSSEKTK SPEQEKSATP PSSITAAKTA 120
121 ITASSKEEPS AARTSPKSLG LKKSVEKLST LVLQLEDVVD KLTKANLDKD ERLLKLEQKI 180
181 GELSK
|
| Detection Method: | |
| Confidence: | 12.79 |
| Match: | 1k83A |
| Description: | RBP1 |
Matching Structure (courtesy of the PDB): |
|
