Protein: | RPN13 |
Organism: | Saccharomyces cerevisiae |
Length: | 156 amino acids |
Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RPN13.
Description | E-value | Query Range |
Subject Range |
|
7.0E-52 | [1..156] | [1..156] |
|
2.0E-46 | [2..132] | [18..131] |
|
1.0E-45 | [2..132] | [17..130] |
|
2.0E-45 | [2..132] | [18..131] |
|
3.0E-45 | [2..132] | [18..131] |
|
9.0E-45 | [2..132] | [18..131] |
|
1.0E-42 | [2..151] | [4..137] |
|
6.0E-42 | [7..143] | [20..157] |
|
6.0E-38 | [3..139] | [10..128] |
Region A: Residues: [1-156] |
1 11 21 31 41 51 | | | | | | 1 MSMSSTVIKF RAGVCEYNED SRLCTPIPVQ GEIEIKPNEE EELGFWDFEW RPTEKPVGRE 60 61 LDPISLILIP GETMWVPIKS SKSGRIFALV FSSNERYFFW LQEKNSGNLP LNELSAKDKE 120 121 IYNKMIGVLN NSSESDEEES NDEKQKAQDV DVSMQD |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
Term | Confidence | Notes |
hydrolase activity | 2.56405396848915 | bayes_pls_golite062009 |
binding | 1.92972815841164 | bayes_pls_golite062009 |
protein binding | 1.26119545864643 | bayes_pls_golite062009 |