| Protein: | RSC2 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 889 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RSC2.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..889] | [1..889] |
|
|
5.0E-91 | [5..591] | [504..1153] |
|
|
4.0E-89 | [5..591] | [506..1154] |
|
|
2.0E-75 | [10..612] | [7..553] |
|
|
3.0E-73 | [3..389] | [60..459] |
|
Region A: Residues: [1-189] |
1 11 21 31 41 51
| | | | | |
1 MMPDDNSNSS TQNSSALYKD LRKEYESLFT LKEDSGLEIS PIFNVLPPKK DYPDYYAVIK 60
61 NPVSFNTLKK RIPHYTDAQQ FMNDVVQIPW NAKTYNTRDS GIYKYALVLE KYLKDTIYPN 120
121 LKEKYPQLVY PDLGPLPDEP GYEEFQQKLR EKAEEVARAN AARAESSSSM NSTEAARRLR 180
181 KTRTSVKRE
|
| Detection Method: |  |
| Confidence: | 60.67837 |
| Match: | 1e6iA_ |
| Description: | GCN5 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [190-275] |
1 11 21 31 41 51
| | | | | |
1 SEPGTDTNND EDYEATDMDI DNPKDADFPD LIRKPLININ PYTRKPLRDN RSTTPSHSGT 60
61 PQPLGPRHRQ VSRTQVKRGR PPIIDL
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [276-393] |
1 11 21 31 41 51
| | | | | |
1 PYIQRMKNVM KVLKKEVLDS GIGLTDLFER LPDRHRDANY YIMIANPISL QDINKKVKTR 60
61 RYKTFQEFQN DFNLMLTNFR ISHRGDPESI KISNILEKTF TSLARFELSK PDRSFIPE
|
| Detection Method: | |
| Confidence: | 23.920819 |
| Match: | PF00439 |
| Description: | Bromodomain |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [394-564] |
1 11 21 31 41 51
| | | | | |
1 GELRYPLDEV IVNNISYHVG DWALLRNQND PQKPIVGQIF RLWKTPDGKQ WLNACWYYRP 60
61 EQTVHRVDRL FYKNEVMKTG QYRDHLVSNL VGKCYVIHFT RYQRGNPDMK LEGPLFVCEF 120
121 RYNESDKIFN KIRTWKACLP EEIRDLDEAT IPVNGRKFFK YPSPIRHLLP A
|
| Detection Method: | |
| Confidence: | 40.721246 |
| Match: | PF01426 |
| Description: | BAH domain |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [565-682] |
1 11 21 31 41 51
| | | | | |
1 NATPHDRVPE PTMGSPDAPP LVGAVYMRPK MQRDDLGEYA TSDDCPRYII RPNDSPEEGQ 60
61 VDIETGTITT NTPTANALPK TGYSSSKLSS LRYNRSSMSL ENQNAIGQQQ IPLSRVGS
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [683-889] |
1 11 21 31 41 51
| | | | | |
1 PGAGGPLTVQ GLKQHQLQRL QQQQHQYQQQ KRSQASRYNI PTIIDDLTSQ ASRGNLGNIM 60
61 IDAASSFVLP ISITKNVDVL QRTDLHSQTK RSGREEMFPW KKTKGEILWF RGPSVIVNER 120
121 IINSGDPHLS LPLNRWFTTN KKRKLEYEEV EETMEDVTGK DKDDDGLEPD VENEKESLPG 180
181 PFVLGLRPSA KFTAHRLSML RPPSSSS
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
