| Protein: | NMA1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 401 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for NMA1.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..401] | [1..401] |
|
|
5.0E-77 | [126..396] | [85..354] |
|
|
6.0E-68 | [158..391] | [1..259] |
|
|
6.0E-67 | [152..391] | [76..340] |
|
Region A: Residues: [1-111] |
1 11 21 31 41 51
| | | | | |
1 MDPTRAPDFK PPSADEELIP PPDPESKIPK SIPIIPYVLA DANSSIDAPF NIKRKKKHPK 60
61 HHHHHHHSRK EGNDKKHQHI PLNQDDFQPL SAEVSSEDDD ADFRSKERYG S
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [112-401] |
1 11 21 31 41 51
| | | | | |
1 DSTTESETRG VQKYQIADLE EVPHGIVRQA RTLEDYEFPS HRLSKKLLDP NKLPLVIVAC 60
61 GSFSPITYLH LRMFEMALDA ISEQTRFEVI GGYYSPVSDN YQKQGLAPSY HRVRMCELAC 120
121 ERTSSWLMVD AWESLQPSYT RTAKVLDHFN HEINIKRGGV ATVTGEKIGV KIMLLAGGDL 180
181 IESMGEPNVW ADADLHHILG NYGCLIVERT GSDVRSFLLS HDIMYEHRRN ILIIKQLIYN 240
241 DISSTKVRLF IRRAMSVQYL LPNSVIRYIQ EHRLYVDQTE PVKQVLGNKE
|
| Detection Method: | |
| Confidence: | 561.165202 |
| Match: | 1kkuA_ |
| Description: | Nicotinamide mononucleotide (NMN) adenylyltransferase |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| ligase activity, forming aminoacyl-tRNA and related compounds | 5.66762539052452 | bayes_pls_golite062009 |
| ligase activity, forming carbon-oxygen bonds | 5.66762539052452 | bayes_pls_golite062009 |
| aminoacyl-tRNA ligase activity | 5.65398773296369 | bayes_pls_golite062009 |
| ligase activity | 4.61911329839139 | bayes_pls_golite062009 |
| nicotinate-nucleotide adenylyltransferase activity | 2.94996967804011 | bayes_pls_golite062009 |
| nicotinamide-nucleotide adenylyltransferase activity | 2.8149071156304 | bayes_pls_golite062009 |
| catalytic activity | 2.37674226834122 | bayes_pls_golite062009 |
| glutamate-tRNA ligase activity | 2.21467185575886 | bayes_pls_golite062009 |
| methionine-tRNA ligase activity | 2.14891246680781 | bayes_pls_golite062009 |
| nucleic acid binding | 1.64840822019417 | bayes_pls_golite062009 |
| tyrosine-tRNA ligase activity | 1.47110858685627 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 1.32767284282317 | bayes_pls_golite062009 |
| binding | 1.11291710031577 | bayes_pls_golite062009 |
| arginine-tRNA ligase activity | 1.0861830757171 | bayes_pls_golite062009 |
| adenylyltransferase activity | 1.08055019963499 | bayes_pls_golite062009 |
| tryptophan-tRNA ligase activity | 0.725178047574893 | bayes_pls_golite062009 |
| nucleotidyltransferase activity | 0.564359271862248 | bayes_pls_golite062009 |
| pantetheine-phosphate adenylyltransferase activity | 0.454904507512502 | bayes_pls_golite062009 |
| cysteine-tRNA ligase activity | 0.430902479559327 | bayes_pls_golite062009 |
| transferase activity | 0.364668631710285 | bayes_pls_golite062009 |
| pantoate-beta-alanine ligase activity | 0.282286652169846 | bayes_pls_golite062009 |
