| Protein: | GSY2 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 705 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GSY2.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..691] | [1..691] |
|
|
0.0 | [4..671] | [23..661] |
|
|
0.0 | [4..671] | [23..661] |
|
|
0.0 | [4..671] | [23..661] |
|
|
0.0 | [4..671] | [23..661] |
|
|
0.0 | [3..686] | [9..666] |
|
Region A: Residues: [1-87] |
1 11 21 31 41 51
| | | | | |
1 MSRDLQNHLL FETATEVANR VGGIYSVLKS KAPITVAQYK DHYHLIGPLN KATYQNEVDI 60
61 LDWKKPEAFS DEMRPVQHAL QTMESRG
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.436 | b.60.1 | Lipocalins |
| View | Download | 0.430 | a.65.1 | Annexin |
| View | Download | 0.509 | d.129.1 | TATA-box binding protein-like |
| View | Download | 0.462 | d.129.2 | Phosphoglucomutase, C-terminal domain |
| View | Download | 0.379 | d.49.1 | Signal recognition particle alu RNA binding heterodimer, SRP9/14 |
| View | Download | 0.374 | d.95.2 | Homing endonucleases |
| View | Download | 0.366 | b.55.1 | PH domain-like |
| View | Download | 0.361 | a.60.6 | DNA polymerase beta, N-terminal domain-like |
| View | Download | 0.358 | c.55.4 | Translational machinery components |
| View | Download | 0.351 | d.58.44 | Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains |
| View | Download | 0.349 | a.74.1 | Cyclin-like |
| View | Download | 0.345 | d.51.1 | Eukaryotic type KH-domain (KH-domain type I) |
| View | Download | 0.340 | b.61.3 | D-aminopeptidase, middle and C-terminal domains |
| View | Download | 0.337 | a.35.1 | lambda repressor-like DNA-binding domains |
| View | Download | 0.332 | b.43.4 | Riboflavin synthase domain-like |
| View | Download | 0.327 | g.3.13 | Bowman-Birk inhibitor, BBI |
| View | Download | 0.326 | b.101.1 | Ribonuclease domain of colicin E3 |
| View | Download | 0.309 | d.41.2 | Quinolinic acid phosphoribosyltransferase (Nicotinate-nucleotide pyrophosphorylase, NadC), N-terminal domain |
| View | Download | 0.308 | d.95.1 | Glucose permease domain IIB |
| View | Download | 0.307 | d.19.1 | MHC antigen-recognition domain |
| View | Download | 0.299 | d.34.1 | DNA-binding domain of Mlu1-box binding protein MBP1 |
| View | Download | 0.277 | a.61.1 | Retroviral matrix proteins |
| View | Download | 0.275 | a.61.1 | Retroviral matrix proteins |
| View | Download | 0.231 | a.65.1 | Annexin |
| View | Download | 0.230 | a.4.1 | Homeodomain-like |
| View | Download | 0.214 | a.74.1 | Cyclin-like |
| View | Download | 0.212 | b.1.18 | E set domains |
| View | Download | 0.205 | b.55.1 | PH domain-like |
| View | Download | 0.202 | d.51.1 | Eukaryotic type KH-domain (KH-domain type I) |
| Term | Confidence | Notes |
| glycogen phosphorylase activity | 4.85572378579745 | bayes_pls_golite062009 |
| phosphorylase activity | 3.90117606315103 | bayes_pls_golite062009 |
| transferase activity, transferring hexosyl groups | 3.13569872928774 | bayes_pls_golite062009 |
| catalytic activity | 2.42803950895063 | bayes_pls_golite062009 |
| transferase activity, transferring glycosyl groups | 2.09333759861004 | bayes_pls_golite062009 |
| glucosyltransferase activity | 1.90464350723601 | bayes_pls_golite062009 |
| transferase activity | 1.88974698466478 | bayes_pls_golite062009 |
| UDP-glycosyltransferase activity | 1.65897712372683 | bayes_pls_golite062009 |
| UDP-glucosyltransferase activity | 1.65637638312265 | bayes_pls_golite062009 |
| UDP-N-acetylglucosamine 2-epimerase activity | 0.988654552791302 | bayes_pls_golite062009 |
| oxidoreductase activity | 0.983614980754643 | bayes_pls_golite062009 |
| carbohydrate phosphatase activity | 0.459821108931138 | bayes_pls_golite062009 |
| binding | 0.45826376378159 | bayes_pls_golite062009 |
| alpha,alpha-trehalose-phosphate synthase (UDP-forming) activity | 0.290421196423307 | bayes_pls_golite062009 |
| protein binding | 0.228850008528478 | bayes_pls_golite062009 |
| sugar binding | 0.0223079311271377 | bayes_pls_golite062009 |
|
Region A: Residues: [88-360] |
1 11 21 31 41 51
| | | | | |
1 VHFVYGRWLI EGAPKVILFD LDSVRGYSNE WKGDLWSLVG IPSPENDFET NDAILLGYTV 60
61 AWFLGEVAHL DSQHAIVAHF HEWLAGVALP LCRKRRIDVV TIFTTHATLL GRYLCASGSF 120
121 DFYNCLESVD VDHEAGRFGI YHRYCIERAA AHSADVFTTV SQITAFEAEH LLKRKPDGIL 180
181 PNGLNVIKFQ AFHEFQNLHA LKKEKINDFV RGHFHGCFDF DLDNTLYFFI AGRYEYKNKG 240
241 ADMFIEALAR LNYRLKVSGS KKTVVAFIVM PAK
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
| Term | Confidence | Notes |
| glycogen phosphorylase activity | 5.43556332287206 | bayes_pls_golite062009 |
| phosphorylase activity | 4.4363209226962 | bayes_pls_golite062009 |
| transferase activity, transferring hexosyl groups | 3.70184884300914 | bayes_pls_golite062009 |
| catalytic activity | 2.65148466065976 | bayes_pls_golite062009 |
| transferase activity, transferring glycosyl groups | 2.62403914335522 | bayes_pls_golite062009 |
| glucosyltransferase activity | 2.48423599937201 | bayes_pls_golite062009 |
| UDP-glucosyltransferase activity | 2.22592863643386 | bayes_pls_golite062009 |
| transferase activity | 2.18054407163329 | bayes_pls_golite062009 |
| UDP-glycosyltransferase activity | 2.13085705769565 | bayes_pls_golite062009 |
| UDP-N-acetylglucosamine 2-epimerase activity | 1.55280519670033 | bayes_pls_golite062009 |
| oxidoreductase activity | 0.974556371594238 | bayes_pls_golite062009 |
| alpha,alpha-trehalose-phosphate synthase (UDP-forming) activity | 0.849686864309466 | bayes_pls_golite062009 |
| carbohydrate phosphatase activity | 0.78952375993773 | bayes_pls_golite062009 |
| binding | 0.399722153246393 | bayes_pls_golite062009 |
| mannosyltransferase activity | 0.253888301381021 | bayes_pls_golite062009 |
| protein binding | 0.198267161626932 | bayes_pls_golite062009 |
| sugar binding | 0.14686473522482 | bayes_pls_golite062009 |
| drug binding | 0.102804615007901 | bayes_pls_golite062009 |
|
Region A: Residues: [361-450] |
1 11 21 31 41 51
| | | | | |
1 NNSFTVEALK GQAEVRALEN TVHEVTTSIG KRIFDHAIRY PHNGLTTELP TDLGELLKSS 60
61 DKVMLKRRIL ALRRPEGQLP PIVTHNMVDD
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.513 | 0.078 | glycogen metabolic process | a.77.1 | DEATH domain |
| View | Download | 0.583 | 0.077 | glycogen metabolic process | a.60.1 | SAM/Pointed domain |
| View | Download | 0.549 | 0.011 | glycogen metabolic process | a.141.1 | Frizzled cystein-rich domain |
| View | Download | 0.535 | 0.005 | glycogen metabolic process | a.163.1 | Crustacean CHH/MIH/GIH neurohormone |
| View | Download | 0.698 | N/A | N/A | d.9.2 | Description not found. |
| View | Download | 0.532 | N/A | N/A | g.24.1 | TNF receptor-like |
| View | Download | 0.506 | N/A | N/A | a.163.1 | Crustacean CHH/MIH/GIH neurohormone |
| View | Download | 0.500 | N/A | N/A | g.24.1 | TNF receptor-like |
| View | Download | 0.496 | N/A | N/A | d.100.1 | L9 N-domain-like |
| View | Download | 0.480 | N/A | N/A | a.163.1 | Crustacean CHH/MIH/GIH neurohormone |
| View | Download | 0.472 | N/A | N/A | d.9.2 | Description not found. |
| View | Download | 0.433 | N/A | N/A | a.77.1 | DEATH domain |
| View | Download | 0.413 | N/A | N/A | d.58.7 | RNA-binding domain, RBD |
| View | Download | 0.384 | N/A | N/A | f.14.1 | Voltage-gated potassium channels |
| View | Download | 0.383 | N/A | N/A | a.163.1 | Crustacean CHH/MIH/GIH neurohormone |
| View | Download | 0.350 | N/A | N/A | d.58.11 | EF-G/eEF-2 domains III and V |
| View | Download | 0.341 | N/A | N/A | d.2.1 | Lysozyme-like |
| View | Download | 0.322 | N/A | N/A | d.58.49 | YajQ-like |
| View | Download | 0.316 | N/A | N/A | d.43.1 | Elongation factor Ts (EF-Ts), dimerisation domain |
| View | Download | 0.315 | N/A | N/A | a.77.1 | DEATH domain |
| View | Download | 0.306 | N/A | N/A | a.77.1 | DEATH domain |
| View | Download | 0.287 | N/A | N/A | a.74.1 | Cyclin-like |
| View | Download | 0.286 | N/A | N/A | a.77.1 | DEATH domain |
| View | Download | 0.279 | N/A | N/A | d.201.1 | SRP19 |
| View | Download | 0.276 | N/A | N/A | f.14.1 | Voltage-gated potassium channels |
| View | Download | 0.274 | N/A | N/A | a.163.1 | Crustacean CHH/MIH/GIH neurohormone |
| View | Download | 0.270 | N/A | N/A | d.57.1 | DNA damage-inducible protein DinI |
| View | Download | 0.268 | N/A | N/A | a.60.1 | SAM/Pointed domain |
| View | Download | 0.267 | N/A | N/A | a.75.1 | Ribosomal protein S7 |
| View | Download | 0.267 | N/A | N/A | d.129.1 | TATA-box binding protein-like |
| View | Download | 0.266 | N/A | N/A | d.129.2 | Phosphoglucomutase, C-terminal domain |
| View | Download | 0.263 | N/A | N/A | d.58.18 | Regulatory domain in the aminoacid metabolism |
| View | Download | 0.261 | N/A | N/A | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.259 | N/A | N/A | d.58.44 | Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains |
| View | Download | 0.251 | N/A | N/A | d.227.1 | OsmC-like |
| View | Download | 0.250 | N/A | N/A | a.26.1 | 4-helical cytokines |
| View | Download | 0.246 | N/A | N/A | d.58.8 | Viral DNA-binding domain |
| View | Download | 0.246 | N/A | N/A | d.52.7 | Ribosome-binding factor A, RbfA |
| View | Download | 0.238 | N/A | N/A | a.144.1 | PABC (PABP) domain |
| View | Download | 0.237 | N/A | N/A | a.118.8 | TPR-like |
| View | Download | 0.231 | N/A | N/A | a.39.1 | EF-hand |
| View | Download | 0.228 | N/A | N/A | d.45.1 | ClpS-like |
| View | Download | 0.224 | N/A | N/A | a.77.1 | DEATH domain |
| View | Download | 0.221 | N/A | N/A | a.144.1 | PABC (PABP) domain |
| View | Download | 0.221 | N/A | N/A | d.52.4 | YhbC-like, N-terminal domain |
| View | Download | 0.221 | N/A | N/A | d.58.3 | Protease propeptides/inhibitors |
| View | Download | 0.219 | N/A | N/A | d.52.5 | Probable GTPase Der, C-terminal domain |
| View | Download | 0.219 | N/A | N/A | a.163.1 | Crustacean CHH/MIH/GIH neurohormone |
| View | Download | 0.218 | N/A | N/A | a.118.8 | TPR-like |
| View | Download | 0.213 | N/A | N/A | a.4.9 | Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 |
| View | Download | 0.212 | N/A | N/A | c.47.1 | Thioredoxin-like |
| View | Download | 0.212 | N/A | N/A | a.39.1 | EF-hand |
| View | Download | 0.211 | N/A | N/A | a.165.1 | Myosin phosphatase inhibitor 17kDa protein, CPI-17 |
| View | Download | 0.210 | N/A | N/A | a.144.1 | PABC (PABP) domain |
| View | Download | 0.210 | N/A | N/A | a.181.1 | Antibiotic binding domain of TipA-like multidrug resistance regulators |
| View | Download | 0.208 | N/A | N/A | a.144.1 | PABC (PABP) domain |
| View | Download | 0.206 | N/A | N/A | a.143.1 | RNA polymerase omega subunit |
| View | Download | 0.202 | N/A | N/A | d.58.5 | GlnB-like |
|
Region A: Residues: [451-653] |
1 11 21 31 41 51
| | | | | |
1 ANDLILNKIR QVQLFNSPSD RVKMIFHPEF LNANNPILGL DYDEFVRGCH LGVFPSYYEP 60
61 WGYTPAECTV MGVPSITTNV SGFGAYMEDL IETNQAKDYG IYIVDRRFKA PDESVEQLVD 120
121 YMEEFVKKTR RQRINQRNRT ERLSDLLDWK RMGLEYVKAR QLALRRGYPD QFRELVGEEL 180
181 NDSNMDALAG GKKLKVARPL SVP
|
| Detection Method: | |
| Confidence: | 7.04 |
| Match: | 1f6dA |
| Description: | UDP-N-acetylglucosamine 2-epimerase |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [654-705] |
1 11 21 31 41 51
| | | | | |
1 GSPRDLRSNS TVYMTPGDLG TLQEVNNADD YFSLGVNPAA DDDDDGPYAD DS
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.532 | g.24.1 | TNF receptor-like |
| View | Download | 0.496 | d.100.1 | L9 N-domain-like |
| View | Download | 0.698 | d.9.2 | Description not found. |
| View | Download | 0.469 | d.9.1 | Interleukin 8-like chemokines |
| View | Download | 0.463 | d.17.3 | Disulfide bond isomerase, DsbC, N-terminal domain |
| View | Download | 0.456 | b.84.2 | Rudiment single hybrid motif |
| View | Download | 0.439 | d.9.1 | Interleukin 8-like chemokines |
| View | Download | 0.433 | d.9.2 | Description not found. |
| View | Download | 0.431 | d.9.1 | Interleukin 8-like chemokines |
| View | Download | 0.421 | d.9.1 | Interleukin 8-like chemokines |
| View | Download | 0.419 | d.9.2 | Description not found. |
| View | Download | 0.399 | b.40.6 | MOP-like |
| View | Download | 0.391 | d.9.1 | Interleukin 8-like chemokines |
| View | Download | 0.383 | d.58.17 | Metal-binding domain |
| View | Download | 0.361 | d.50.1 | dsRNA-binding domain-like |
| View | Download | 0.357 | b.107.1 | Urease metallochaperone UreE, N-terminal domain |
| View | Download | 0.322 | d.9.1 | Interleukin 8-like chemokines |
| View | Download | 0.286 | d.49.1 | Signal recognition particle alu RNA binding heterodimer, SRP9/14 |
| View | Download | 0.283 | d.9.2 | Description not found. |
| View | Download | 0.271 | b.38.1 | Sm-like ribonucleoproteins |
| View | Download | 0.256 | d.49.1 | Signal recognition particle alu RNA binding heterodimer, SRP9/14 |
| View | Download | 0.253 | d.9.2 | Description not found. |
| View | Download | 0.250 | d.19.1 | MHC antigen-recognition domain |
| View | Download | 0.249 | b.40.6 | MOP-like |
| View | Download | 0.246 | d.19.1 | MHC antigen-recognition domain |
| View | Download | 0.230 | b.107.1 | Urease metallochaperone UreE, N-terminal domain |
| View | Download | 0.228 | d.49.1 | Signal recognition particle alu RNA binding heterodimer, SRP9/14 |
| View | Download | 0.218 | d.9.2 | Description not found. |
| View | Download | 0.212 | d.49.1 | Signal recognition particle alu RNA binding heterodimer, SRP9/14 |
| View | Download | 0.204 | d.58.5 | GlnB-like |
