Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YLR253W.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..569] | [1..569] |
|
|
0.0 | [22..551] | [31..526] |
|
|
4.0E-97 | [56..552] | [19..490] |
|
|
5.0E-97 | [29..550] | [71..588] |
|
|
5.0E-93 | [69..563] | [9..504] |
|
|
6.0E-92 | [31..557] | [8..528] |
|
|
8.0E-92 | [39..531] | [14..484] |
|
Region A: Residues: [1-153] |
1 11 21 31 41 51
| | | | | |
1 MMTKAFFNKL PFEVFRRYVR TGKSIPQRSP RTRKSLLVGG TIASAVVLYN FNDTFHDSVK 60
61 HTALTTKRIA VVTQATTRCF YHYKRALNKS YENKKEREVA LNKCHKMCAL ITLHALRSNG 120
121 GIYIKLGQHI GAMTYLLPKE WTDTMIPLQD HCP
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.539 | a.29.3 | Acyl-CoA dehydrogenase C-terminal domain-like |
| View | Download | 0.520 | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.547 | a.26.1 | 4-helical cytokines |
| View | Download | 0.524 | a.63.1 | Apolipophorin-III |
| View | Download | 0.547 | a.26.1 | 4-helical cytokines |
| View | Download | 0.539 | a.29.3 | Acyl-CoA dehydrogenase C-terminal domain-like |
| View | Download | 0.524 | a.63.1 | Apolipophorin-III |
| View | Download | 0.520 | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.492 | a.29.3 | Acyl-CoA dehydrogenase C-terminal domain-like |
| View | Download | 0.476 | f.36.1 | Neurotransmitter-gated ion-channel pransmembrane pore |
| View | Download | 0.444 | a.63.1 | Apolipophorin-III |
| View | Download | 0.428 | a.24.12 | Outer surface protein C (OspC) |
| View | Download | 0.425 | f.1.4 | Bcl-2 inhibitors of programmed cell death |
| View | Download | 0.413 | a.29.3 | Acyl-CoA dehydrogenase C-terminal domain-like |
| View | Download | 0.409 | a.168.1 | GEF domain of SopE toxin |
| View | Download | 0.408 | a.85.1 | Hemocyanin, N-terminal domain |
| View | Download | 0.402 | a.74.1 | Cyclin-like |
| View | Download | 0.397 | a.85.1 | Hemocyanin, N-terminal domain |
| View | Download | 0.396 | a.7.4 | Smac/diablo |
| View | Download | 0.394 | a.26.1 | 4-helical cytokines |
| View | Download | 0.393 | a.74.1 | Cyclin-like |
| View | Download | 0.386 | a.118.8 | TPR-like |
| View | Download | 0.385 | a.24.2 | Aspartate receptor, ligand-binding domain |
| View | Download | 0.384 | a.24.9 | alpha-catenin/vinculin |
| View | Download | 0.366 | a.24.2 | Aspartate receptor, ligand-binding domain |
| View | Download | 0.365 | a.100.1 | 6-phosphogluconate dehydrogenase C-terminal domain-like |
| View | Download | 0.361 | c.45.1 | (Phosphotyrosine protein) phosphatases II |
| View | Download | 0.360 | a.24.3 | Cytochromes |
| View | Download | 0.360 | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.360 | a.118.8 | TPR-like |
| View | Download | 0.349 | d.110.4 | SNARE-like |
| View | Download | 0.347 | b.88.1 | Mss4-like |
| View | Download | 0.338 | a.63.1 | Apolipophorin-III |
| View | Download | 0.337 | a.29.2 | Bromodomain |
| View | Download | 0.335 | a.24.2 | Aspartate receptor, ligand-binding domain |
| View | Download | 0.323 | c.2.1 | NAD(P)-binding Rossmann-fold domains |
| View | Download | 0.320 | a.7.3 | Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain |
| View | Download | 0.316 | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.315 | c.49.1 | Pyruvate kinase, C-terminal domain |
| View | Download | 0.314 | f.1.4 | Bcl-2 inhibitors of programmed cell death |
| View | Download | 0.312 | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.310 | a.24.14 | FAT domain of focal adhesion kinase |
| View | Download | 0.310 | f.1.4 | Bcl-2 inhibitors of programmed cell death |
| View | Download | 0.308 | a.19.1 | Fertilization protein |
| View | Download | 0.301 | a.24.9 | alpha-catenin/vinculin |
| View | Download | 0.300 | a.62.1 | Hepatitis B viral capsid (hbcag) |
| View | Download | 0.298 | a.22.1 | Histone-fold |
| View | Download | 0.297 | a.24.4 | Hemerythrin |
| View | Download | 0.296 | a.47.2 | t-snare proteins |
| View | Download | 0.296 | c.26.2 | Adenine nucleotide alpha hydrolases-like |
| View | Download | 0.294 | f.1.4 | Bcl-2 inhibitors of programmed cell death |
| View | Download | 0.292 | a.47.1 | STAT |
| View | Download | 0.289 | a.47.2 | t-snare proteins |
| View | Download | 0.289 | d.58.34 | Formiminotransferase domain of formiminotransferase-cyclodeaminase. |
| View | Download | 0.286 | a.1.2 | alpha-helical ferredoxin |
| View | Download | 0.282 | a.24.9 | alpha-catenin/vinculin |
| View | Download | 0.282 | a.40.1 | Calponin-homology domain, CH-domain |
| View | Download | 0.281 | f.36.1 | Neurotransmitter-gated ion-channel pransmembrane pore |
| View | Download | 0.280 | a.24.4 | Hemerythrin |
| View | Download | 0.278 | c.26.2 | Adenine nucleotide alpha hydrolases-like |
| View | Download | 0.272 | a.102.4 | Terpenoid cylases/Protein prenyltransferases |
| View | Download | 0.266 | f.1.4 | Bcl-2 inhibitors of programmed cell death |
| View | Download | 0.265 | b.88.1 | Mss4-like |
| View | Download | 0.261 | d.54.1 | Enolase N-terminal domain-like |
| View | Download | 0.259 | f.14.1 | Voltage-gated potassium channels |
| View | Download | 0.257 | a.133.1 | Phospholipase A2, PLA2 |
| View | Download | 0.257 | a.24.9 | alpha-catenin/vinculin |
| View | Download | 0.249 | a.26.1 | 4-helical cytokines |
| View | Download | 0.249 | a.79.1 | Antitermination factor NusB |
| View | Download | 0.246 | c.2.1 | NAD(P)-binding Rossmann-fold domains |
| View | Download | 0.245 | f.1.4 | Bcl-2 inhibitors of programmed cell death |
| View | Download | 0.241 | a.47.2 | t-snare proteins |
| View | Download | 0.240 | a.24.9 | alpha-catenin/vinculin |
| View | Download | 0.239 | a.133.1 | Phospholipase A2, PLA2 |
| View | Download | 0.237 | a.24.9 | alpha-catenin/vinculin |
| View | Download | 0.236 | a.24.9 | alpha-catenin/vinculin |
| View | Download | 0.236 | a.118.1 | ARM repeat |
| View | Download | 0.236 | a.118.1 | ARM repeat |
| View | Download | 0.235 | a.7.8 | GAT domain |
| View | Download | 0.235 | a.26.1 | 4-helical cytokines |
| View | Download | 0.233 | a.26.1 | 4-helical cytokines |
| View | Download | 0.232 | f.35.1 | Multidrug efflux transporter AcrB transmembrane domain |
| View | Download | 0.225 | f.36.1 | Neurotransmitter-gated ion-channel pransmembrane pore |
| View | Download | 0.223 | a.26.1 | 4-helical cytokines |
| View | Download | 0.223 | a.47.1 | STAT |
| View | Download | 0.222 | a.7.1 | Spectrin repeat |
| View | Download | 0.219 | d.54.1 | Enolase N-terminal domain-like |
| View | Download | 0.217 | f.13.1 | Family A G protein-coupled receptor-like |
| View | Download | 0.216 | a.74.1 | Cyclin-like |
| View | Download | 0.216 | f.1.4 | Bcl-2 inhibitors of programmed cell death |
| View | Download | 0.215 | f.25.1 | Cytochrome c oxidase subunit III-like |
| View | Download | 0.214 | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.212 | a.123.1 | Nuclear receptor ligand-binding domain |
| View | Download | 0.208 | a.133.1 | Phospholipase A2, PLA2 |
| View | Download | 0.205 | c.62.1 | vWA-like |
| View | Download | 0.200 | a.24.4 | Hemerythrin |
|
Region A: Residues: [154-300] |
1 11 21 31 41 51
| | | | | |
1 ESTYEEIDEL FKEDLGTSIE DMFLEFNKTP IGVASLAQVH VAKLKNSDGK GSSVAVKCQH 60
61 PSLKEFIPLD VMLTRTVFEL LDVFFPDYPL TWLGDELQSS IYVELNFTKE AENAEKTRHY 120
121 FSKFKKQTAL KIPKVIESHK RILIMEY
|
| Detection Method: | |
| Confidence: | 33.522879 |
| Match: | 1f3mC_ |
| Description: | pak1 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| protein kinase activity | 2.78878187773119 | bayes_pls_golite062009 |
| phosphotransferase activity, alcohol group as acceptor | 2.65696220652782 | bayes_pls_golite062009 |
| protein serine/threonine kinase activity | 2.52043782881479 | bayes_pls_golite062009 |
| kinase activity | 2.45757516485965 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 2.08265655536291 | bayes_pls_golite062009 |
| binding | 1.72646207655432 | bayes_pls_golite062009 |
| catalytic activity | 1.21655087018101 | bayes_pls_golite062009 |
| transferase activity | 1.09650209608069 | bayes_pls_golite062009 |
| ATP binding | 0.57612786382221 | bayes_pls_golite062009 |
| adenyl ribonucleotide binding | 0.533622009869642 | bayes_pls_golite062009 |
| protein binding | 0.529222066176906 | bayes_pls_golite062009 |
| adenyl nucleotide binding | 0.516315256680509 | bayes_pls_golite062009 |
| purine ribonucleotide binding | 0.366733507123411 | bayes_pls_golite062009 |
| ribonucleotide binding | 0.366674148714169 | bayes_pls_golite062009 |
| purine nucleotide binding | 0.355425813353478 | bayes_pls_golite062009 |
| nucleotide binding | 0.350202706382045 | bayes_pls_golite062009 |
|
Region A: Residues: [301-494] |
1 11 21 31 41 51
| | | | | |
1 VGGKRLDDLE YIDSHGISRS EVSSCLSHIF NNMIFTPNVG IHCDPHGGNL AIRSVKPAKD 60
61 NGYHNFEIVL FDHGLYRYPS TRTRRLYAKF WLSLLFDKDQ TKMKKYAKGF ANITDEQFPL 120
121 LAAAITGRSI DAALNYDIST SRTQEEMDVM ANGILEGTLL SDLMSILSRI PRVVLLILKT 180
181 NDLTRHLDEC LQNP
|
| Detection Method: | |
| Confidence: | 33.522879 |
| Match: | 1f3mC_ |
| Description: | pak1 |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [495-569] |
1 11 21 31 41 51
| | | | | |
1 LGPERTFLIM TQYCAKTVYD EKVERINSEY ARWSIKWMWE NLTNWIVYER RINQLYFYDF 60
61 VLWWKKFIPK TWLSS
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
