| Protein: | RCK2 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 610 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RCK2.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..610] | [1..610] |
|
|
0.0 | [46..582] | [17..547] |
|
|
0.0 | [121..582] | [6..462] |
|
|
0.0 | [54..581] | [16..537] |
|
|
0.0 | [5..582] | [520..1074] |
|
Region A: Residues: [1-120] |
1 11 21 31 41 51
| | | | | |
1 MLKIKALFSK KKPDQADLSQ ESKKPFKGKT RSSGTNNKDV SQITSSPKKS FQDKNIVQYP 60
61 SVVADDHHMK SLTDELVTTI DSDSSPSDNI TTENVETVTS VPAIDVHESS EGQLSSDPLI 120
121
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [121-272] |
1 11 21 31 41 51
| | | | | |
1 SDESLSEQSE IISDIQDDST DDDNMEDEIP EKSFLEQKEL IGYKLINKIG EGAFSKVFRA 60
61 IPAKNSSNEF LTKNYKAVAI KVIKKADLSS INGDHRKKDK GKDSTKTSSR DQVLKEVALH 120
121 KTVSAGCSQI VAFIDFQETD SYYYIIQELL TG
|
| Detection Method: | |
| Confidence: | 519.855515 |
| Match: | 1a06__ |
| Description: | Calmodulin-dependent protein kinase |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [273-532] |
1 11 21 31 41 51
| | | | | |
1 GEIFGEIVRL TYFSEDLSRH VIKQLALAVK HMHSLGVVHR DIKPENLLFE PIEFTRSIKP 60
61 KLRKSDDPQT KADEGIFTPG VGGGGIGIVK LADFGLSKQI FSKNTKTPCG TVGYTAPEVV 120
121 KDEHYSMKVD MWGIGCVLYT MLCGFPPFYD EKIDTLTEKI SRGEYTFLKP WWDEISAGAK 180
181 NAVAKLLELE PSKRYDIDQF LDDPWLNTFD CLPKEGESSQ KKAGTSERRH PHKKQFQLFQ 240
241 RDSSLLFSPA AVAMRDAFDI
|
| Detection Method: | |
| Confidence: | 519.855515 |
| Match: | 1a06__ |
| Description: | Calmodulin-dependent protein kinase |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [533-610] |
1 11 21 31 41 51
| | | | | |
1 GNAVKRTEED RMGTRGGLGS LAEDEELEDS YSGAQGDEQL EQNMFQLTLD TSTILQRRKK 60
61 VQENDVGPTI PISATIRE
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
