| Protein: | RCK2 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 610 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RCK2.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..610] | [1..610] |
|
|
0.0 | [46..582] | [17..547] |
|
|
0.0 | [121..582] | [6..462] |
|
|
0.0 | [54..581] | [16..537] |
|
|
0.0 | [5..582] | [520..1074] |
|
Region A: Residues: [1-120] |
1 11 21 31 41 51
| | | | | |
1 MLKIKALFSK KKPDQADLSQ ESKKPFKGKT RSSGTNNKDV SQITSSPKKS FQDKNIVQYP 60
61 SVVADDHHMK SLTDELVTTI DSDSSPSDNI TTENVETVTS VPAIDVHESS EGQLSSDPLI 120
121
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.791 | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.791 | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.513 | a.66.1 | Transducin (alpha subunit), insertion domain |
| View | Download | 0.547 | a.118.11 | Cytochrome c oxidase subunit E |
| View | Download | 0.513 | a.66.1 | Transducin (alpha subunit), insertion domain |
| View | Download | 0.547 | a.118.11 | Cytochrome c oxidase subunit E |
| View | Download | 0.475 | a.121.1 | Tetracyclin repressor-like, C-terminal domain |
| View | Download | 0.475 | a.121.1 | Tetracyclin repressor-like, C-terminal domain |
| View | Download | 0.452 | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.452 | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.406 | a.24.10 | Histidine-containing phosphotransfer domain, HPT domain |
| View | Download | 0.402 | a.29.2 | Bromodomain |
| View | Download | 0.364 | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.349 | a.118.1 | ARM repeat |
| View | Download | 0.338 | a.118.8 | TPR-like |
| View | Download | 0.338 | a.1.1 | Globin-like |
| View | Download | 0.328 | a.39.2 | Insect pheromon/odorant-binding proteins |
| View | Download | 0.325 | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.319 | d.58.39 | Glutamyl tRNA-reductase catalytic, N-terminal domain |
| View | Download | 0.310 | a.54.1 | Domain of early E2A DNA-binding protein, ADDBP |
| View | Download | 0.304 | a.7.8 | GAT domain |
| View | Download | 0.291 | a.77.1 | DEATH domain |
| View | Download | 0.271 | a.71.1 | Endoplasmic reticulum protein ERP29, C-domain |
| View | Download | 0.262 | a.1.1 | Globin-like |
| View | Download | 0.258 | a.29.4 | RecG, N-terminal domain |
| View | Download | 0.250 | a.100.1 | 6-phosphogluconate dehydrogenase C-terminal domain-like |
| View | Download | 0.250 | d.58.26 | GHMP Kinase, C-terminal domain |
| View | Download | 0.237 | a.118.9 | ENTH/VHS domain |
| View | Download | 0.230 | a.118.9 | ENTH/VHS domain |
| View | Download | 0.227 | a.72.1 | Functional domain of the splicing factor Prp18 |
| View | Download | 0.222 | c.23.1 | CheY-like |
| View | Download | 0.220 | a.24.15 | FAD-dependent thiol oxidase |
| View | Download | 0.217 | a.118.13 | Arp2/3 complex 16 kDa subunit ARPC5 |
| View | Download | 0.207 | a.3.1 | Cytochrome c |
| View | Download | 0.205 | f.1.4 | Bcl-2 inhibitors of programmed cell death |
| View | Download | 0.204 | a.39.1 | EF-hand |
|
Region A: Residues: [121-272] |
1 11 21 31 41 51
| | | | | |
1 SDESLSEQSE IISDIQDDST DDDNMEDEIP EKSFLEQKEL IGYKLINKIG EGAFSKVFRA 60
61 IPAKNSSNEF LTKNYKAVAI KVIKKADLSS INGDHRKKDK GKDSTKTSSR DQVLKEVALH 120
121 KTVSAGCSQI VAFIDFQETD SYYYIIQELL TG
|
| Detection Method: | |
| Confidence: | 519.855515 |
| Match: | 1a06__ |
| Description: | Calmodulin-dependent protein kinase |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [273-532] |
1 11 21 31 41 51
| | | | | |
1 GEIFGEIVRL TYFSEDLSRH VIKQLALAVK HMHSLGVVHR DIKPENLLFE PIEFTRSIKP 60
61 KLRKSDDPQT KADEGIFTPG VGGGGIGIVK LADFGLSKQI FSKNTKTPCG TVGYTAPEVV 120
121 KDEHYSMKVD MWGIGCVLYT MLCGFPPFYD EKIDTLTEKI SRGEYTFLKP WWDEISAGAK 180
181 NAVAKLLELE PSKRYDIDQF LDDPWLNTFD CLPKEGESSQ KKAGTSERRH PHKKQFQLFQ 240
241 RDSSLLFSPA AVAMRDAFDI
|
| Detection Method: | |
| Confidence: | 519.855515 |
| Match: | 1a06__ |
| Description: | Calmodulin-dependent protein kinase |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [533-610] |
1 11 21 31 41 51
| | | | | |
1 GNAVKRTEED RMGTRGGLGS LAEDEELEDS YSGAQGDEQL EQNMFQLTLD TSTILQRRKK 60
61 VQENDVGPTI PISATIRE
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.373 | a.64.1 | Saposin |
| View | Download | 0.354 | a.37.1 | A DNA-binding domain in eukaryotic transcription factors |
| View | Download | 0.391 | a.51.1 | Cytochrome c oxidase subunit h |
| View | Download | 0.291 | a.57.1 | Protein HNS-dependent expression A; HdeA |
| View | Download | 0.222 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.211 | a.48.3 | Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 |
| View | Download | 0.207 | a.60.3 | C-terminal domain of RNA polymerase alpha subunit |
| View | Download | 0.204 | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
