Protein: | PWP1 |
Organism: | Saccharomyces cerevisiae |
Length: | 576 amino acids |
Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PWP1.
Description | E-value | Query Range |
Subject Range |
|
0.0 | [2..574] | [909..1476] |
|
0.0 | [46..540] | [825..1314] |
Region A: Residues: [1-115] |
1 11 21 31 41 51 | | | | | | 1 MISATNWVPR GFSSEFPEKY VLDDEEVERI NQLAQLNLDD AKATLEEAEG ESGVEDDAAT 60 61 GSSNKLKDQL DIDDDLKEYN LEEYDDEEIA DNEGGKDVSM FPGLSNDSDV KFHEG |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
Region A: Residues: [116-454] |
1 11 21 31 41 51 | | | | | | 1 EKGEDPYISL PNQEDSQEEK QELQVYPSDN LVLAARTEDD VSYLDIYVYD DGAGFHSSDI 60 61 PVEEGDEADP DVARGLVRDP ALYVHHDLML PAFPLCVEWL DYKVGSNSEE AANYAAIGTF 120 121 DPQIEIWNLD CVDKAFPDMI LGEPLDNSMV SLKSKKKKKK SKTGHITTHH TDAVLSMAHN 180 181 KYFRSVLAST SADHTVKLWD LNSGNAARSL ASIHSNKNVS SSEWHMLNGS ILLTGGYDSR 240 241 VALTDVRISD ESQMSKYWSA MAGEEIETVT FASENIILCG TDSGNVYSFD IRNNENRKPV 300 301 WTLKAHDAGI STLCSNKFIP GMMSTGAMGE KTVKLWKFP |
Detection Method: | ![]() |
Confidence: | 69.30103 |
Match: | 1gg2B_ |
Description: | beta1-subunit of the signal-transducing G protein heterotrimer |
Matching Structure (courtesy of the PDB):![]() |
Region A: Residues: [455-576] |
1 11 21 31 41 51 | | | | | | 1 LDDATNTKGP SMVLSRDFDV GNVLTSSFAP DIEVAGTMVI GGVNKVLKLW DVFTNRSVRK 60 61 SFKSELENVQ ARAKEEAQKI GKSSRIARKY TSNDNPDTVI TIDDQGEDEE EREGGDEHDD 120 121 MA |
Detection Method: | ![]() |
Confidence: | 11.1 |
Match: | 1jjuB |
Description: | Quinohemoprotein amine dehydrogenase B chain |
Matching Structure (courtesy of the PDB):![]() |
Term | Confidence | Notes |
binding | 2.42725361829881 | bayes_pls_golite062009 |
catalytic activity | 0.233388920718075 | bayes_pls_golite062009 |
protein binding | 0.220695015309846 | bayes_pls_golite062009 |
Region A: Residues: [407-576] |
1 11 21 31 41 51 | | | | | | 1 RNNENRKPVW TLKAHDAGIS TLCSNKFIPG MMSTGAMGEK TVKLWKFPLD DATNTKGPSM 60 61 VLSRDFDVGN VLTSSFAPDI EVAGTMVIGG VNKVLKLWDV FTNRSVRKSF KSELENVQAR 120 121 AKEEAQKIGK SSRIARKYTS NDNPDTVITI DDQGEDEEER EGGDEHDDMA |
Detection Method: | ![]() |
Confidence: | 65.69897 |
Match: | 2ovpB |
Description: | No description for 2ovpB was found. |