| Protein: | PWP1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 576 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PWP1.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [2..574] | [909..1476] |
|
|
0.0 | [46..540] | [825..1314] |
|
Region A: Residues: [1-115] |
1 11 21 31 41 51
| | | | | |
1 MISATNWVPR GFSSEFPEKY VLDDEEVERI NQLAQLNLDD AKATLEEAEG ESGVEDDAAT 60
61 GSSNKLKDQL DIDDDLKEYN LEEYDDEEIA DNEGGKDVSM FPGLSNDSDV KFHEG
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [116-454] |
1 11 21 31 41 51
| | | | | |
1 EKGEDPYISL PNQEDSQEEK QELQVYPSDN LVLAARTEDD VSYLDIYVYD DGAGFHSSDI 60
61 PVEEGDEADP DVARGLVRDP ALYVHHDLML PAFPLCVEWL DYKVGSNSEE AANYAAIGTF 120
121 DPQIEIWNLD CVDKAFPDMI LGEPLDNSMV SLKSKKKKKK SKTGHITTHH TDAVLSMAHN 180
181 KYFRSVLAST SADHTVKLWD LNSGNAARSL ASIHSNKNVS SSEWHMLNGS ILLTGGYDSR 240
241 VALTDVRISD ESQMSKYWSA MAGEEIETVT FASENIILCG TDSGNVYSFD IRNNENRKPV 300
301 WTLKAHDAGI STLCSNKFIP GMMSTGAMGE KTVKLWKFP
|
| Detection Method: | |
| Confidence: | 69.30103 |
| Match: | 1gg2B_ |
| Description: | beta1-subunit of the signal-transducing G protein heterotrimer |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [455-576] |
1 11 21 31 41 51
| | | | | |
1 LDDATNTKGP SMVLSRDFDV GNVLTSSFAP DIEVAGTMVI GGVNKVLKLW DVFTNRSVRK 60
61 SFKSELENVQ ARAKEEAQKI GKSSRIARKY TSNDNPDTVI TIDDQGEDEE EREGGDEHDD 120
121 MA
|
| Detection Method: | |
| Confidence: | 11.1 |
| Match: | 1jjuB |
| Description: | Quinohemoprotein amine dehydrogenase B chain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 2.42725361829881 | bayes_pls_golite062009 |
| catalytic activity | 0.233388920718075 | bayes_pls_golite062009 |
| protein binding | 0.220695015309846 | bayes_pls_golite062009 |
|
Region A: Residues: [407-576] |
1 11 21 31 41 51
| | | | | |
1 RNNENRKPVW TLKAHDAGIS TLCSNKFIPG MMSTGAMGEK TVKLWKFPLD DATNTKGPSM 60
61 VLSRDFDVGN VLTSSFAPDI EVAGTMVIGG VNKVLKLWDV FTNRSVRKSF KSELENVQAR 120
121 AKEEAQKIGK SSRIARKYTS NDNPDTVITI DDQGEDEEER EGGDEHDDMA
|
| Detection Method: | |
| Confidence: | 65.69897 |
| Match: | 2ovpB |
| Description: | No description for 2ovpB was found. |
