| Protein: | RAX2 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 1220 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RAX2.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..1220] | [1..1220] |
|
|
0.0 | [149..1068] | [123..1038] |
|
Region A: Residues: [1-1220] |
1 11 21 31 41 51
| | | | | |
1 MFVHRLWTLA FPFLVEISKA SQLENIKSLL DIEDNVLPNL NISQNNSNAV QILGGVDALS 60
61 FYEYTGQQNF TKEIGPETSS HGLVYYSNNT YIQLEDASDD TRIDKITPFG VDSFILSGSG 120
121 TINNISVGNQ ILYNLSTLSM TPIFNQSLGA VQAVLADNSS IYFGGNFSYN NGSMTGYSAL 180
181 IWDSISNTTQ LLPFGGFGEN SSVNSIVKLN NDNILFAGQF YTLDDPSALI SSSNNGTNST 240
241 SSLNATTLEL GQRIPLRYAS WDSQGSTTFA SDSLVCPNTN EDAWLYPDTS GSLVCNLPYE 300
301 VSPTKIRLYN SQRSDSEISV FQILTDPSSS IMNLTYLDPL SGELKNCGEF CPLYSRATLL 360
361 SASQNVSSSM DMITFIDNNK TDVKWTSDFQ DFAFVNELPV SSLKFVALNS YGGSVGLSGL 420
421 ELYQDTFSTY ANDSLNEYGC SALTNDSSSS TLSSNDWYNG LTGESYIAAK YVPDQNEPIP 480
481 RVKFYPNIIH PGHYTINMYT PGCLQDNTCS ARGIVNVTMW NQQNNTIMKT YLIYQNNDNL 540
541 KYDQIYSGYL DFSPEIVLEY VSGIYTTNTA TVVVADQVNV ITVSLDAFNT LSDSSNAKKE 600
601 TLLNGILQYQ KSNFTSTRLN ETKVGNTTLN LFPVKNYPKN SSLYADIYDN KLVIGGVSNR 660
661 ISIVDLNDDF EVTSSKNQTI QGDVHGITKT NQGLLIFGDI LSSNNQSAVF LFNGSFENVF 720
721 NQSRTVNSAL NISLANNDFI VLDNDYVVNA SSNALIRNSS SFSLSLWAAG NNGDGDVLFS 780
781 GAVSHMQYGN LNGSVRFLNE NEIEPLNLEG GIVPYLGAYL NESATAYAYE VDSLNKIYFS 840
841 NEVYPSWNWS SGITQMLYAD NQTLLAVSAG SSTTAELSIF DLRNLTMIAN ETLGSNARIN 900
901 ALVNFEKNCS MLVGGDFQMT EPNCTGLCLY NYESKTWSTF LNNTIFGEIT QLSFTNSSEL 960
961 IISGLFETKE YQSIRLGSFN LTNSTMIPLL SGSEGKLNSF TVTEDSIVAW NDTSLFIYRN1020
1021 QEWNITSLPG NASSISSVSA IYTDIESNTL NKRGINNVNN GSILLLNGNF NISQYGYLQS1080
1081 LLFDFQKWTP YFISETTNTS NYNPIIFINR DVSTEFNSQS PLANVNITVT SPQSTSSQPP1140
1141 SSSASSESKS KSKKKKIGRG FVVLIGLALA LGTVSVLGIA GVILAYVFKD PEGDYKPIKP1200
1201 RIDENEMLDT VPPEKLMKFV
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
| Term | Confidence | Notes |
| binding | 2.16129867759095 | bayes_pls_golite062009 |
| protein binding | 1.40069187357924 | bayes_pls_golite062009 |
| small GTPase regulator activity | 1.37810819223456 | bayes_pls_golite062009 |
| GTPase regulator activity | 1.30109857016182 | bayes_pls_golite062009 |
| nucleoside-triphosphatase regulator activity | 1.28664652111481 | bayes_pls_golite062009 |
| enzyme regulator activity | 0.957155201002138 | bayes_pls_golite062009 |
| cation channel activity | 0.852133790882907 | bayes_pls_golite062009 |
| ligand-gated ion channel activity | 0.820543200551171 | bayes_pls_golite062009 |
| ligand-gated channel activity | 0.820543200551171 | bayes_pls_golite062009 |
| ion channel activity | 0.758864161786375 | bayes_pls_golite062009 |
| gated channel activity | 0.746871434679286 | bayes_pls_golite062009 |
| signal transducer activity | 0.689775744703145 | bayes_pls_golite062009 |
| molecular transducer activity | 0.689775744703145 | bayes_pls_golite062009 |
| GDP-dissociation inhibitor activity | 0.128923535412438 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 0.0852462445742306 | bayes_pls_golite062009 |
|
Region A: Residues: [597-772] |
1 11 21 31 41 51
| | | | | |
1 AKKETLLNGI LQYQKSNFTS TRLNETKVGN TTLNLFPVKN YPKNSSLYAD IYDNKLVIGG 60
61 VSNRISIVDL NDDFEVTSSK NQTIQGDVHG ITKTNQGLLI FGDILSSNNQ SAVFLFNGSF 120
121 ENVFNQSRTV NSALNISLAN NDFIVLDNDY VVNASSNALI RNSSSFSLSL WAAGNN
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [773-846] |
1 11 21 31 41 51
| | | | | |
1 GDGDVLFSGA VSHMQYGNLN GSVRFLNENE IEPLNLEGGI VPYLGAYLNE SATAYAYEVD 60
61 SLNKIYFSNE VYPS
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [847-1054] |
1 11 21 31 41 51
| | | | | |
1 WNWSSGITQM LYADNQTLLA VSAGSSTTAE LSIFDLRNLT MIANETLGSN ARINALVNFE 60
61 KNCSMLVGGD FQMTEPNCTG LCLYNYESKT WSTFLNNTIF GEITQLSFTN SSELIISGLF 120
121 ETKEYQSIRL GSFNLTNSTM IPLLSGSEGK LNSFTVTEDS IVAWNDTSLF IYRNQEWNIT 180
181 SLPGNASSIS SVSAIYTDIE SNTLNKRG
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1055-1138] |
1 11 21 31 41 51
| | | | | |
1 INNVNNGSIL LLNGNFNISQ YGYLQSLLFD FQKWTPYFIS ETTNTSNYNP IIFINRDVST 60
61 EFNSQSPLAN VNITVTSPQS TSSQ
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1139-1220] |
1 11 21 31 41 51
| | | | | |
1 PPSSSASSES KSKSKKKKIG RGFVVLIGLA LALGTVSVLG IAGVILAYVF KDPEGDYKPI 60
61 KPRIDENEML DTVPPEKLMK FV
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
