| Protein: | GPI13 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 1017 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GPI13.
| Description | E-value | Query Range |
Subject Range |
|
|
712.0 | [0..1] | [1017..1] |
|
|
648.0 | [0..34] | [1012..4] |
|
|
633.0 | [0..1] | [1017..9] |
|
|
612.0 | [0..22] | [1017..30] |
|
|
599.0 | [0..35] | [1002..3] |
|
|
584.0 | [0..25] | [997..9] |
|
|
566.0 | [0..34] | [1012..4] |
|
|
442.0 | [0..35] | [1017..48] |
|
|
439.0 | [0..32] | [668..3] |
|
Region A: Residues: [1-75] |
1 11 21 31 41 51
| | | | | |
1 MDEKTIKKSI LSSSNDEKII YKSRIKKFQK NHKFYIILLV FIAILQFISI AFFTRGFLLS 60
61 RHVLDNISSQ NETSK
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.711 | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.689 | a.118.1 | ARM repeat |
| View | Download | 0.639 | a.17.1 | p8-MTCP1 |
| View | Download | 0.634 | a.230.1 | Description not found. |
| View | Download | 0.612 | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.591 | d.204.1 | Ribosome binding protein Y (YfiA homologue) |
| View | Download | 0.583 | a.118.8 | TPR-like |
| View | Download | 0.544 | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.530 | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.500 | a.74.1 | Cyclin-like |
|
Region A: Residues: [76-413] |
1 11 21 31 41 51
| | | | | |
1 LPPRFNKAVI LVIDALRFDF AIPVNESHSN YNLNYHNNIL SLYDSFASDK DASSLLLKFI 60
61 ADPPTTTLQR LKGLTTGSLP TFIDAGSNFD GTVIEEDNFL KQLHLANKTV KFAGDDTWMA 120
121 LFHPFLSNDS FPLESLNVWD LDTVDNGVMD YFHDHLQQDK EWDVMIGHML GIDHVGHKYG 180
181 PDHFTMREKQ IQVDQFIDWI LKSIDDDTLL VILGDHGMDH TGNHGGDSID ELESTLFLYS 240
241 KKPDMWRLKE TSNYNIDNLG HDYRSVRQID LVSSLALLMG QPIPFNNLGW PIDEIARNDR 300
301 EWSQFVNSAI SQLQLYKDTM QIHHGNDEIL EPLAKNIS
|
| Detection Method: | |
| Confidence: | 37.30103 |
| Match: | 1ejjA |
| Description: | 2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, substrate-binding domain; 2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, catalytic domain |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [414-556] |
1 11 21 31 41 51
| | | | | |
1 NTPPTSDPEK FVKLGHKYQK VFLQTCEELW AKFDYYSIAT GITLLATSLV LLISITKLIP 60
61 SIVVNQMVPE FVPGIIIMVL VTNLCFHGIF YVYQQPSFVD QFWGTLLATA IGIIIGCYIT 120
121 IFDRYNFIWI AMRLGETLAD YWS
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.900 | N/A | N/A | a.1.1 | Globin-like |
| View | Download | 0.849 | N/A | N/A | a.1.1 | Globin-like |
| View | Download | 0.849 | N/A | N/A | a.1.1 | Globin-like |
| View | Download | 0.789 | N/A | N/A | a.1.1 | Globin-like |
| View | Download | 0.789 | N/A | N/A | a.1.1 | Globin-like |
| View | Download | 0.756 | N/A | N/A | a.1.1 | Globin-like |
| View | Download | 0.723 | N/A | N/A | a.1.1 | Globin-like |
| View | Download | 0.686 | N/A | N/A | a.1.1 | Globin-like |
| View | Download | 0.685 | N/A | N/A | a.79.1 | Antitermination factor NusB |
|
Region A: Residues: [557-620] |
1 11 21 31 41 51
| | | | | |
1 RIAVMFMIIH ALLFTSNSFT IWEDRIVAFL LSTFGMLTLY EFVFLPKRQS TTALLTATIS 60
61 EKEG
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.782 | a.4.1 | Homeodomain-like |
| View | Download | 0.774 | a.64.1 | Saposin |
| View | Download | 0.761 | a.4.1 | Homeodomain-like |
| View | Download | 0.758 | a.4.1 | Homeodomain-like |
| View | Download | 0.755 | a.182.1 | GatB/YqeY domain |
| View | Download | 0.651 | a.64.2 | Bacteriocin AS-48 |
| View | Download | 0.613 | a.64.1 | Saposin |
| View | Download | 0.606 | a.64.1 | Saposin |
|
Region A: Residues: [621-1017] |
1 11 21 31 41 51
| | | | | |
1 TTSGVNPSTA NSNYLPLTRF ARLLGGYHSA VLIIFTRLAS MITICREEQG EYCIPTFNNQ 60
61 NNSSWWVLGL CFLMIFILPA CITGYYNLTS SYQAAAPIWI NVFLKGILGL NFVYWSLTSL 120
121 ENNSAVIAIP FLRDVTIFKF TLARIIAGFS LIASNVGWLM GPLCIKLNIH NTDVKSHEAT 180
181 ILGYTNIYGS EFFLLVINVL ISILLFNKPL AQLSYFLMCN QLLSILEIID LLKLKENIIG 240
241 PIALGLLSYQ HFFTTGHQAT IPSVQWDIGF MLSEKVTFPF TQIAIILNTF GPHILVSLSV 300
301 ALLTLWSQPP DVLKPQTLLG RIVSNCGILL TYNTILCLSS FIWVTHFRRH LMVWKIFCPR 360
361 FIFASLSLIV TQLVVTFGTI AFASGRLIKH INDIFWK
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
