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Protein Overview: gpi13

General Information:
Name(s) found: gpi13 / SPBC27B12.06 [Sanger Pombe]
Description(s) found:
Found 21 descriptions.
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  • pig-O [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 918 amino acids

    Gene Ontology:
    Cellular Component: integral to membrane [IEA]
    endoplasmic reticulum [IDALink to PubMed article][ISSLink to PubMed article]
    Biological Process: GPI anchor biosynthetic process [ISSLink to PubMed article]
    Molecular Function: mannose-ethanolamine phosphotransferase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEEKRVKCKK KLTSTIGTWK YIQACIFFAI ILISNFYGLK SFTDGFLLRR AVLNQTSLCE  60
   61 NPPADVREWK NSSGCWAPKI FERAVIVIID ALRYDFLIPY NDSNYYHNAF TTPYETSVLH 120
  121 PENSYLTQFI ADAPTTTSQR LKGLTTGSLP TFIDLGSNFA GTNIDEDNLL LQWKSLDKQI 180
  181 VLLGDDTWDV LFHDYLNETL SQPAFSFNVP DLHGVDNKVN QYVFDYIKDA NFDVLIAHYL 240
  241 GVDHVGHRLG PDHPTMRDKL NQMDRCVKEM MDLLDDSTLL IVMGDHGMDN KGNHGGDSFD 300
  301 EINSVLWMYS KKPTFGYLKQ PGKVLSANQV DLVPTLSLLL GNPIPYGNLG TLIPEPFYYY 360
  361 GDEYLSKAQK INIGQLNRFF SEYDLDASDF LSSSVHKNNN SYLDQYFLDF DYARDAFSYF 420
  421 KAIWAEFSLF PMIIGFLLLI IGGFNLALLM QDKSVIFRMS ANMAPSVMKC LPVCLILILA 480
  481 NNELHSPFPA EFYVLLPSFY ILLNSFNQKL MEYFKGFVKL DYFSIFITFL HVCSFGSNSF 540
  541 TVWEDRLCHF LIITIGLVMF CKCFSEMSPL FACSTYSALA FILLQVISSY VTNCREEQGA 600
  601 FCVSTYISTP DNSLRTLIVL ALMALSSIIL PLILQLHLRR VLGLSLKLYH LSILYFFELI 660
  661 SSIFWIAHHV FANDALLEKQ YHHVLYSLAN TYVICILGVL IWQFFLLSRS KFAKINVIER 720
  721 SYFVFALLYS FLSFLQRPLG HLSLFSCFLQ ILLLIQLKQW QPSVGHNFFS VTLGLLGLSH 780
  781 FFTTGNQAAI SSLDWNFAFI HSKSAENQAI SAIFMFLHTV GAPILTCISI PLFSFEPLSK 840
  841 KNRFLINLFR FSFSFILYNL LISTSTVFFA GFFRRHLMVW KVFAPRFMLS GILLVTHQLF 900
  901 VLIQCFGSSV VKFPEDAE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..440] PSI-BLAST 38.221849 Arylsulfatase A
    2 View Details [441..610] deduced N/A No confident structure predictions are available.
    3 View Details [611..672] deduced N/A No confident structure predictions are available.
    4 View Details [673..746] deduced N/A No confident structure predictions are available.
    5 View Details [747..918] MSA 4.113989 View MSA. No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • hydrolase activity, acting on ester bonds
    		•  2.50752017262291 bayes_pls_golite062009
  • catalytic activity
    		•  2.31328968099128 bayes_pls_golite062009
  • phosphatase activity
    		•  1.06063475304592 bayes_pls_golite062009
  • phosphoric ester hydrolase activity
    		•  0.861123866751778 bayes_pls_golite062009
  • sulfuric ester hydrolase activity
    		•  0.81599167262629 bayes_pls_golite062009
  • hydrolase activity
    		•  0.63862822518663 bayes_pls_golite062009
  • binding
    		•  0.543713736726232 bayes_pls_golite062009
  • protein binding
    		•  0.169222906224633 bayes_pls_golite062009
    2 No functions predicted.
    3 No functions predicted.
    4 No functions predicted.
    5 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle