| Protein: | RPF2 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 344 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RPF2.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..344] | [1..344] |
|
|
0.0 | [3..299] | [6..290] |
|
|
0.0 | [1..295] | [1..292] |
|
|
0.0 | [1..304] | [3..295] |
|
|
0.0 | [3..249] | [6..240] |
|
|
0.0 | [1..297] | [1..286] |
|
|
1.0E-94 | [4..305] | [5..300] |
|
Region A: Residues: [1-262] |
1 11 21 31 41 51
| | | | | |
1 MIRTVKPKNA RAKRALVKRE AKLVENVKQA LFIPGQSCNK NLHDIMVDLS ALKKPDMKRF 60
61 NRKNDIHPFE DMSPLEFFSE KNDCSLMVLM TSSKKRKNNM TFIRTFGYKI YDMIELMVAD 120
121 NFKLLSDFKK LTFTVGLKPM FTFQGAAFDT HPVYKQIKSL FLDFFRGEST DLQDVAGLQH 180
181 VISMTIQGDF QDGEPLPNVL FRVYKLKSYK SDQGGKRLPR IELVEIGPRL DFKIGRIHTP 240
241 SPDMVTEAHK KPKQLEMKTK KN
|
| Detection Method: |  |
| Confidence: | 168.022276 |
| Match: | PF03679 |
| Description: | No description for PF03679 was found. |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
| Term | Confidence | Notes |
| aminoacyl-tRNA ligase activity | 3.51611427841435 | bayes_pls_golite062009 |
| ligase activity, forming carbon-oxygen bonds | 3.51602790171379 | bayes_pls_golite062009 |
| ligase activity, forming aminoacyl-tRNA and related compounds | 3.51602790171379 | bayes_pls_golite062009 |
| ligase activity | 2.39787140469438 | bayes_pls_golite062009 |
| binding | 1.79619860046184 | bayes_pls_golite062009 |
| proline-tRNA ligase activity | 1.61792117479721 | bayes_pls_golite062009 |
| catalytic activity | 0.853948963582441 | bayes_pls_golite062009 |
| protein binding | 0.668055564043996 | bayes_pls_golite062009 |
|
Region A: Residues: [263-344] |
1 11 21 31 41 51
| | | | | |
1 VELDIMGDKL GRIHMGKQDL GKLQTRKMKG LKSKFDQGTE EGDGEVDEDY EDEASYSDDG 60
61 QEYEEEFVSA TDIEPSAKRQ KK
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
