| Protein: | TRZ1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 838 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TRZ1.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..838] | [1..838] |
|
|
0.0 | [4..831] | [106..888] |
|
|
0.0 | [4..826] | [51..784] |
|
|
0.0 | [4..813] | [59..775] |
|
|
0.0 | [4..813] | [59..775] |
|
|
0.0 | [4..813] | [59..775] |
|
Region A: Residues: [1-204] |
1 11 21 31 41 51
| | | | | |
1 MFTFIPITHP TSDTKHPLLL VQSAHGEKYF FGKIGEGSQR SLTENKIRIS KLKDIFLTGE 60
61 LNWSDIGGLP GMILTIADQG KSNLVLHYGN DILNYIVSTW RYFVFRFGID LNDHIMKDKE 120
121 VYKDKIIAVK SFNVLKNGGE DRLGVFDSFQ KGVLRSIVAK MFPKHAPTDR YDPSSDPHLN 180
181 VELPDLDAKV EVSTNYEISF SPVR
|
| Detection Method: |  |
| Confidence: | 1.66 |
| Match: | 1qh5A |
| Description: | Glyoxalase II (hydroxyacylglutathione hydrolase) |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 1.25638799652541 | bayes_pls_golite062009 |
| 3'-tRNA processing endoribonuclease activity | 0.998280249151351 | bayes_pls_golite062009 |
| nucleic acid binding | 0.980281910076056 | bayes_pls_golite062009 |
| catalytic activity | 0.941400907161877 | bayes_pls_golite062009 |
| RNA binding | 0.794779546418275 | bayes_pls_golite062009 |
| protein binding | 0.0732519352239051 | bayes_pls_golite062009 |
|
Region A: Residues: [205-308] |
1 11 21 31 41 51
| | | | | |
1 GKFKVEEAIK LGVPKGPLFA KLTKGQTITL DNGIVVTPEQ VLENERHFAK VLILDIPDDL 60
61 YLNAFVEKFK DYDCAELGMV YYFLGDEVTI NDNLFAFIDI FEKN
|
| Detection Method: | |
| Confidence: | 1.66 |
| Match: | 1qh5A |
| Description: | Glyoxalase II (hydroxyacylglutathione hydrolase) |
| Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 1.31163219351982 | bayes_pls_golite062009 |
| nucleic acid binding | 0.995499818152009 | bayes_pls_golite062009 |
| catalytic activity | 0.888964130802536 | bayes_pls_golite062009 |
| RNA binding | 0.752641444664237 | bayes_pls_golite062009 |
| 3'-tRNA processing endoribonuclease activity | 0.6076643116915 | bayes_pls_golite062009 |
| protein binding | 0.104060533429009 | bayes_pls_golite062009 |
|
Region A: Residues: [309-456] |
1 11 21 31 41 51
| | | | | |
1 NYGKVNHMIS HNKISPNTIS FFGSALTTLK LKALQVNNYN LPKTDRVFSK DFYDRFDTPL 60
61 SRGTSMCKSQ EEPLNTIIEK DNIHIFSQNK TVTFEPFRMN EEPMKCNING EVADFSWQEI 120
121 FEEHVKPLEF PLADVDTVIN NQLHVDNF
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [457-639] |
1 11 21 31 41 51
| | | | | |
1 NNSAEKKKHV EIITLGTGSA LPSKYRNVVS TLVKVPFTDA DGNTINRNIM LDAGENTLGT 60
61 IHRMFSQLAV KSIFQDLKMI YLSHLHADHH LGIISVLNEW YKYNKDDETS YIYVVTPWQY 120
121 HKFVNEWLVL ENKEILKRIK YISCEHFIND SFVRMQTQSV PLAEFNEILK ENSNQESNRK 180
181 LEL
|
| Detection Method: | |
| Confidence: | 4.30103 |
| Match: | 1e5dA_ |
| Description: | Rubredoxin oxygen:oxidoreductase (ROO), C-terminal domain; Rubredoxin oxygen:oxidoreductase (ROO), N-terminal domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 1.25638799652541 | bayes_pls_golite062009 |
| 3'-tRNA processing endoribonuclease activity | 0.998280249151351 | bayes_pls_golite062009 |
| nucleic acid binding | 0.980281910076056 | bayes_pls_golite062009 |
| catalytic activity | 0.941400907161877 | bayes_pls_golite062009 |
| RNA binding | 0.794779546418275 | bayes_pls_golite062009 |
| protein binding | 0.0732519352239051 | bayes_pls_golite062009 |
|
Region A: Residues: [640-838] |
1 11 21 31 41 51
| | | | | |
1 DRDSSYRDVD LIRQMYEDLS IEYFQTCRAI HCDWAYSNSI TFRMDENNEH NTFKVSYSGD 60
61 TRPNIEKFSL EIGYNSDLLI HEATLENQLL EDAVKKKHCT INEAIGVSNK MNARKLILTH 120
121 FSQRYPKLPQ LDNNIDVMAR EFCFAFDSMI VDYEKIGEQQ RIFPLLNKAF VEEKEEEEDV 180
181 DDVESVQDLE VKLKKHKKN
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
