YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: gi|22330184, gi|...

General Information:
Name(s) found: gi|22330184 [NCBI NR]
gi|21436181 [NCBI NR]
gi|17979121 [NCBI NR]
Description(s) found:
Found 10 descriptions.
SHOW ALL
  • gi|22330184|ref|NP_175628.2| TRZ3 (TRNASE Z 3); 3'-tRNA processing endoribonuclease/ catalytic [Arabidopsis thaliana] [NCBI NR]
  • gi|21436181|gb|AAM51378.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • gi|17979121|gb|AAL49818.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 890 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: metabolic process [ISS]
    tRNA 3'-end processing [IDA]
    Molecular Function: catalytic activity [ISS]
    3'-tRNA processing endoribonuclease activity [IDA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MINSMPYLHK NLRLLRLLSS KSSPFPLSLR PFSPRSFSLS TLFSSSSSSS SMENNEATNG  60
   61 SKSSSNSFVF NKRRAEGFDI TDKKKRNLER KSQKLNPTNT IAYAQILGTG MDTQDTSSSV 120
  121 LLFFDKQRFI FNAGEGLQRF CTEHKIKLSK IDHVFLSRVC SETAGGLPGL LLTLAGIGEE 180
  181 GLSVNVWGPS DLNYLVDAMK SFIPRAAMVH TRSFGPSSTP DPIVLVNDEV VKISAIILKP 240
  241 CHSEEDSGNK SGDLSVVYVC ELPEILGKFD LEKAKKVFGV KPGPKYSRLQ SGESVKSDER 300
  301 DITVHPSDVM GPSLPGPIVL LVDCPTESHA AELFSLKSLE SYYSSPDEQT IGAKFVNCII 360
  361 HLSPSSVTSS PTYQSWMKKF HLTQHILAGH QRKNMAFPIL KASSRIAARL NYLCPQFFPA 420
  421 PGFWPSQLTD NSIIDPTPSN KCSSSNLAES ISAENLLKFN LRPVAIRGID RSCIPAPLTS 480
  481 SEVVDELLSE IPEIKDKSEE IKQFWNKQHN KTIIEKLWLS ECNTVLPNCL EKIRRDDMEI 540
  541 VILGTGSSQP SKYRNVSAIF IDLFSRGSLL LDCGEGTLGQ LKRRYGLDGA DEAVRKLRCI 600
  601 WISHIHADHH TGLARILALR SKLLKGVTHE PVIVVGPRPL KRFLDAYQRL EDLDMEFLDC 660
  661 RSTTATSWAS LESGGEAEGS LFTQGSPMQS VFKRSDISMD NSSVLLCLKN LKKVLSEIGL 720
  721 NDLISFPVVH CPQAYGVVIK AAERVNSVGE QILGWKMVYS GDSRPCPETV EASRDATILI 780
  781 HEATFEDALI EEALAKNHST TKEAIDVGSA ANVYRIVLTH FSQRYPKIPV IDESHMHNTC 840
  841 IAFDLMSINM ADLHVLPKVL PYFKTLFRDE MVEDEDADDV AMDDLKEEAL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..99] deduced N/A No confident structure predictions are available.
    2 View Details [100..549] PSI-BLAST 44.30103 No description for 2i7tA was found.
    3 View Details [550..890] PSI-BLAST 61.69897 Crystal structure of RNase Z


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle