| Protein: | FRE2 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 711 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FRE2.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..711] | [1..711] |
|
|
0.0 | [72..709] | [199..938] |
|
|
0.0 | [72..709] | [207..921] |
|
|
0.0 | [71..709] | [229..962] |
|
|
0.0 | [72..709] | [207..921] |
|
Region A: Residues: [1-218] |
1 11 21 31 41 51
| | | | | |
1 MHWTSILSAI LLFCLSGARA SPAKTVIRNK VPLLVTNACT RIFQKVTWEY TSKSKRSSPV 60
61 CSYEPAFQSM LYCIYETLDE KGYSNKTLEK TFSTIKKNCA SYSDALQNMT NSEFYDVLNN 120
121 GTRHMTPYVK GSANLTYPVE MDTQLRKAYY HALHGFYANL DVGNIYGGII CAYFVAIMAF 180
181 AGVLHCMNYT PFKTVLLKQK LVGYVRGYLT LPTIGSKH
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [219-344] |
1 11 21 31 41 51
| | | | | |
1 ASDFSYFRIF TGYLPTRLEG IIILGYLVLH TVFLAYGYEY DPENIIFKSR RVQVARYVAD 60
61 RSGVLAFAHF PLIVLFAGRN NFLEYISGVK YTSFIMFHKW LGRMMFLDAM IHGSAYTSYT 120
121 VANKTW
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [345-405] |
1 11 21 31 41 51
| | | | | |
1 ATSKNRLYWQ FGVAALCLAG TMVFFSFAVF RKYFYEAFLF LHIVLGAMFF YACWEHVVSL 60
61 S
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.916 | a.24.9 | alpha-catenin/vinculin |
|
Region A: Residues: [406-528] |
1 11 21 31 41 51
| | | | | |
1 GIEWIYTAIA IWIVDRIIRI IKASYFGFPK ASLQLIGDDL IRLTVKKPAR PWRAKPGQYV 60
61 FVSFLHPLYF WQSHPFTVLD SVSKNGELVI ILKEKKGVTR LVKKYVCRNG GKTSMRLAIE 120
121 GPY
|
| Detection Method: | |
| Confidence: | 53.0 |
| Match: | 1cnf__ |
| Description: | Nitrate reductase core domain; Nitrate reductase |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| catalytic activity | 1.45374095556065 | bayes_pls_golite062009 |
| transferase activity | 1.15480450573972 | bayes_pls_golite062009 |
| binding | 1.13408475648113 | bayes_pls_golite062009 |
| oxidoreductase activity | 0.27336340260908 | bayes_pls_golite062009 |
| protein binding | 0.144900113694048 | bayes_pls_golite062009 |
| cofactor binding | 0.0731141170494622 | bayes_pls_golite062009 |
|
Region A: Residues: [529-711] |
1 11 21 31 41 51
| | | | | |
1 GSSSPVNNYN NVLLLTGGTG LPGPIAHAIK LGKTSAAAGK QSVKLVIAVR GFDVLEAYKP 60
61 ELMCLENLNV QLHIYNTMEV PSLTPSDSLD ISQQDEKADE KGTVVATTLE KSANPLGFDG 120
121 VVFHCGRPNV KELLHEAAEL SGSLSVVCCG PPIFVDKVRN ETAKIVLDKS AKAIEYFEEY 180
181 QCW
|
| Detection Method: | |
| Confidence: | 53.0 |
| Match: | 1cnf__ |
| Description: | Nitrate reductase core domain; Nitrate reductase |
| Matching Structure (courtesy of the PDB): |
|
