| Protein: | MCD4 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 919 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MCD4.
| Description | E-value | Query Range |
Subject Range |
|
|
804.0 | [0..7] | [906..2] |
|
|
788.0 | [0..7] | [906..2] |
|
|
781.0 | [0..7] | [906..2] |
|
|
772.0 | [0..7] | [906..2] |
|
|
741.0 | [0..7] | [906..58] |
|
|
719.0 | [0..9] | [909..5] |
|
Region A: Residues: [1-383] |
1 11 21 31 41 51
| | | | | |
1 MWNKTRTTLL AVGVLFHLFY LWSIFDIYFI SPLVHGMSPY QSTPTPPAKR LFLIVGDGLR 60
61 ADTTFDKVTH PVSGKTEFLA PFIRSLVMNN ATYGISHTRM PTESRPGHVA MIAGFYEDVS 120
121 AVTKGWKSNP VNFDSFFNQS THTYSFGSPD ILPMFKDGAS DPNKVDTWMY DHTFEDFTQS 180
181 SIELDAFVFR HLDQLFHNST LNSTLDYEIR QDGNVFFLHL LGCDTAGHSY RPYSAEYYDN 240
241 VKYIDDQIPI LIDKVNKFFA DDKTAFIFTA DHGMSAFGSH GDGHPNNTRT PLVAWGAGLN 300
301 KPVHNPFPVS DNYTENWELS SIKRNDVKQA DIASLMSYLI GVNYPKNSVG ELPIAYIDGK 360
361 ESDKLAALYN NARSILEQYL VKQ
|
| Detection Method: |  |
| Confidence: | 33.221849 |
| Match: | 1e1zP |
| Description: | Arylsulfatase A |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [384-535] |
1 11 21 31 41 51
| | | | | |
1 DEVIDSQFFY KEYFKFVEKS HSHYLEEIET LIQRISEGEN YLEQEAITLT EELMQITLEG 60
61 LHYLTTYNWR FIRTIVTFGF VGWIFFSFII FLKSFILENV IDDQKASPLS HAVFGSIGIL 120
121 LNWILFYQHS PFNFYMYLLF PLYFWSYIFT NR
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.908 | N/A | N/A | a.25.1 | Ferritin-like |
| View | Download | 0.904 | N/A | N/A | a.29.3 | Acyl-CoA dehydrogenase C-terminal domain-like |
| View | Download | 0.889 | N/A | N/A | a.215.1 | Description not found. |
| View | Download | 0.867 | N/A | N/A | a.29.3 | Acyl-CoA dehydrogenase C-terminal domain-like |
| View | Download | 0.864 | N/A | N/A | a.29.13 | Description not found. |
| View | Download | 0.795 | N/A | N/A | a.151.1 | Glutamyl tRNA-reductase dimerization domain |
| View | Download | 0.772 | N/A | N/A | a.24.9 | alpha-catenin/vinculin |
| View | Download | 0.758 | N/A | N/A | a.47.2 | t-snare proteins |
| View | Download | 0.734 | N/A | N/A | a.24.9 | alpha-catenin/vinculin |
| View | Download | 0.722 | N/A | N/A | f.36.1 | Neurotransmitter-gated ion-channel pransmembrane pore |
|
Region A: Residues: [536-919] |
1 11 21 31 41 51
| | | | | |
1 SVLRSGIKEF FKGTSPWKRV LITISIISVY EGIVYGFFHR WTFTLITNIL AFYPFICGVR 60
61 ELSVNILWII TSVLLSTFTL FDAVKIEDLN QIHLAGLLII LSAFYALYKI HSRINSYTRA 120
121 IFAIQISLVA AMLAVTHRSV ISLQLRQGLP RESQVAGWII FFVSLFVMPI LHYRKPNNDY 180
181 KVRLLIIYLT FAPSFIILTI SFESLFYFLF TSYMVQWIEI ENKIKEMKTQ KDENWLQVLR 240
241 VSVIGFFLLQ VAFFGTGNVA SISSFSLESV CRLLPIFDPF LMGALLMLKL IIPYGLLSTC 300
301 LGILNLKLNF KDYTISSLII SMSDILSLNF FYLLRTEGSW LDIGITISNY CLAILSSLFM 360
361 LILEVLGHVL LKNVIIQDKT KKTQ
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
