| Protein: | ABF1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 731 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ABF1.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..731] | [1..731] |
|
|
1.0E-65 | [267..439] | [81..257] |
|
|
4.0E-63 | [267..439] | [81..257] |
|
|
1.0E-55 | [284..439] | [114..277] |
|
Region A: Residues: [1-78] |
1 11 21 31 41 51
| | | | | |
1 MDKLVVNYYE YKHPIINKDL AIGAHGGKKF PTLGAWYDVI NEYEFQTRCP IILKNSHRNK 60
61 HFTFACHLKN CPFKVLLS
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [79-176] |
1 11 21 31 41 51
| | | | | |
1 YAGNAASSET SSPSANNNTN PPGTPDHIHH HSNNMNNEDN DNNNGSNNKV SNDSKLDFVT 60
61 DDLEYHLANT HPDDTNDKVE SRSNEVNGNN DDDADANN
|
| Detection Method: | |
| Confidence: | 7.56 |
| Match: | 1l8mA |
| Description: | No description for 1l8mA was found. |
|
Region A: Residues: [177-245] |
1 11 21 31 41 51
| | | | | |
1 IFKQQGVTIK NDTEDDSINK ASIDRGLDDE SGPTHGNDSG NHRHNEEDDV HTQMTKNYSD 60
61 VVNDEDINV
|
| Detection Method: | |
| Confidence: | 7.56 |
| Match: | 1l8mA |
| Description: | No description for 1l8mA was found. |
|
Region A: Residues: [246-320] |
1 11 21 31 41 51
| | | | | |
1 AIANAVANVD SQSNNKHDGK DDDATNNNDG QDNNTNNDHN NNSNINNNNV GSHGISSHSP 60
61 SSIRDTSMNL DVFNS
|
| Detection Method: | |
| Confidence: | 7.56 |
| Match: | 1l8mA |
| Description: | No description for 1l8mA was found. |
|
Region A: Residues: [321-481] |
1 11 21 31 41 51
| | | | | |
1 ATDDIPGPFV VTKIEPYHSH PLEDNLSLGK FILTKIPKIL QNDLKFDQIL ESSYNNSNHT 60
61 VSKFKVSHYV EESGLLDILM QRYGLTAEDF EKRLLSQIAR RITTYKARFV LKKKKMGEYN 120
121 DLQPSSSSNN NNNNDGELSG TNLRSNSIDY AKHQEISSAG T
|
|
Region B: Residues: [518-560] |
1 11 21 31 41 51
| | | | | |
1 KTSSHRYQPK KMPSVNKWSK PDQITHSDVS MVGLDESNDG GNE
|
| Detection Method: | |
| Confidence: | 7.09 |
| Match: | 1itwA |
| Description: | Monomeric isocitrate dehydrogenase |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [482-517] |
1 11 21 31 41 51
| | | | | |
1 SSNTTKNVNN NKNDSNDDNN GNNNNDASNL MESVLD
|
|
Region B: Residues: [561-731] |
1 11 21 31 41 51
| | | | | |
1 NVHPTLAEVD AQEARETAQL AIDKINSYKR SIDDKNGDGH NNSSRNVVDE NLINDMDSED 60
61 AHKSKRQHLS DITLEERNED DKLPHEVAEQ LRLLSSHLKE VENLHQNNDD DVDDVMVDVD 120
121 VESQYNKNTT HHNNHHSQPH HDEEDVAGLI GKADDEEDLS DENIQPELRG Q
|
| Detection Method: | |
| Confidence: | 7.09 |
| Match: | 1itwA |
| Description: | Monomeric isocitrate dehydrogenase |
| Matching Structure (courtesy of the PDB): |
|
