Protein: | TEF4 |
Organism: | Saccharomyces cerevisiae |
Length: | 412 amino acids |
Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TEF4.
Description | E-value | Query Range |
Subject Range |
|
0.0 | [1..412] | [1..437] |
|
0.0 | [1..412] | [1..437] |
|
0.0 | [1..412] | [1..437] |
|
0.0 | [6..412] | [1..432] |
|
0.0 | [1..412] | [1..436] |
|
0.0 | [1..412] | [1..436] |
|
0.0 | [1..412] | [1..442] |
Region A: Residues: [1-80] |
1 11 21 31 41 51 | | | | | | 1 MSQGTLYINR SPRNYASEAL ISYFKLDVKI VDLEQSSEFA SLFPLKQAPA FLGPKGLKLT 60 61 EALAIQFYLA NQVADEKERA |
Detection Method: | ![]() |
Confidence: | 66.533179 |
Match: | 1bx9A_ |
Description: | Class phi GST |
Matching Structure (courtesy of the PDB):![]() |
Term | Confidence | Notes |
transcription regulator activity | 2.30799114442278 | bayes_pls_golite062009 |
nucleic acid binding | 2.06381591939564 | bayes_pls_golite062009 |
DNA binding | 1.92118545500784 | bayes_pls_golite062009 |
binding | 1.25802922431343 | bayes_pls_golite062009 |
transcription activator activity | 1.23146660729357 | bayes_pls_golite062009 |
protein binding | 1.18479617596618 | bayes_pls_golite062009 |
catalytic activity | 0.672192331361968 | bayes_pls_golite062009 |
RNA binding | 0.382017633056715 | bayes_pls_golite062009 |
0.359224524631956 | bayes_pls_golite062009 | |
receptor binding | 0.0497559408754589 | bayes_pls_golite062009 |
Region A: Residues: [81-247] |
1 11 21 31 41 51 | | | | | | 1 RLLGSDVIEK SQILRWASLA NSDVMSNIAR PFLSFKGLIP YNKKDVDACF VKIDNLAAVF 60 61 DARLRDYTFV ATENISLGDL HAAGSWAFGL ATILGPEWRA KHPHLMRWFN TVAASPIVKT 120 121 PFAEVKLAEK ALTYTPPKKQ KAEKPKAEKS KAEKKKDEAK PADDAAP |
Detection Method: | ![]() |
Confidence: | 66.533179 |
Match: | 1bx9A_ |
Description: | Class phi GST |
Matching Structure (courtesy of the PDB):![]() |
Term | Confidence | Notes |
translation elongation factor activity | 11.9602302019768 | bayes_pls_golite062009 |
translation factor activity, nucleic acid binding | 7.4644014407268 | bayes_pls_golite062009 |
translation regulator activity | 7.42485540728491 | bayes_pls_golite062009 |
nucleic acid binding | 3.9329721501879 | bayes_pls_golite062009 |
binding | 3.0325775548747 | bayes_pls_golite062009 |
protein binding | 1.65598815428763 | bayes_pls_golite062009 |
Region A: Residues: [248-412] |
1 11 21 31 41 51 | | | | | | 1 AKKPKHPLEA LGKSTFVLDD WKRKYSNDDT RPVALPWFWE HYNPEEYSIW KVGYKYNDEL 60 61 TLTFMSNNLV GGFFNRLSAS TKYMFGCLVV YGENNNNGIV GAVMVRGQDF APAFDVAPDW 120 121 ESYEYTKLDP TKEEDKEFVN NMWAWDKPVV VNGEDKEIVD GKVLK |
Detection Method: | ![]() |
Confidence: | 81.920819 |
Match: | PF00647 |
Description: | Elongation factor 1 gamma, conserved domain |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.