Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YKL050C.
| Description | E-value | Query Range |
Subject Range |
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4.0E-96 | [3..749] | [1144..1937] |
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6.0E-96 | [3..749] | [1145..1938] |
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1.0E-95 | [3..749] | [1146..1939] |
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1.0E-95 | [3..749] | [99..892] |
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2.0E-95 | [3..749] | [143..936] |
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2.0E-95 | [3..749] | [1146..1939] |
|
Region A: Residues: [1-72] |
1 11 21 31 41 51
| | | | | |
1 MSLISALQTT DVESVQTSPE QITERKAVRV STLQESLHSS EMHRAAPETP RSISNSVHKL 60
61 KTIYSTYQQS GQ
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.693 | a.2.2 | Ribosomal protein L29 (L29p) |
| View | Download | 0.681 | a.7.2 | Enzyme IIa from lactose specific PTS, IIa-lac |
| View | Download | 0.580 | a.7.7 | BAG domain |
| View | Download | 0.564 | a.4.1 | Homeodomain-like |
| View | Download | 0.557 | a.24.3 | Cytochromes |
| View | Download | 0.538 | a.60.1 | SAM/Pointed domain |
| View | Download | 0.536 | a.7.8 | GAT domain |
| View | Download | 0.527 | a.2.3 | Chaperone J-domain |
| View | Download | 0.517 | a.47.2 | t-snare proteins |
| View | Download | 0.500 | a.60.1 | SAM/Pointed domain |
| View | Download | 0.497 | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.497 | a.52.1 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin |
| View | Download | 0.493 | a.23.1 | HSC20 (HSCB), C-terminal oligomerisation domain |
| View | Download | 0.491 | a.13.1 | alpha-2-Macroglobulin receptor associated protein (RAP) domain 1 |
| View | Download | 0.466 | a.4.13 | Sigma3 and sigma4 domains of RNA polymerase sigma factors |
| View | Download | 0.447 | a.7.3 | Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain |
| View | Download | 0.426 | a.164.1 | C-terminal domain of DFF45/ICAD (DFF-C domain) |
| View | Download | 0.414 | a.4.11 | RNA polymerase subunit RPB10 |
| View | Download | 0.411 | a.7.3 | Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain |
| View | Download | 0.408 | a.46.1 | Methionine synthase domain |
| View | Download | 0.405 | a.112.1 | Description not found. |
| View | Download | 0.402 | a.24.7 | FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP) |
| View | Download | 0.382 | a.36.1 | Signal peptide-binding domain |
| View | Download | 0.364 | a.21.1 | HMG-box |
| View | Download | 0.360 | a.24.17 | Group V grass pollen allergen |
| View | Download | 0.350 | a.26.1 | 4-helical cytokines |
| View | Download | 0.344 | a.30.2 | Homodimeric domain of signal transducing histidine kinase |
| View | Download | 0.333 | a.2.7 | tRNA-binding arm |
| View | Download | 0.328 | a.91.1 | Regulator of G-protein signalling, RGS |
| View | Download | 0.313 | a.4.9 | Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 |
| View | Download | 0.312 | a.17.1 | p8-MTCP1 |
| View | Download | 0.308 | a.100.1 | 6-phosphogluconate dehydrogenase C-terminal domain-like |
| View | Download | 0.298 | a.60.5 | Barrier-to-autointegration factor, BAF |
| View | Download | 0.295 | f.17.1 | F1F0 ATP synthase subunit C |
| View | Download | 0.295 | i.1.1 | Ribosome and ribosomal fragments |
| View | Download | 0.286 | d.188.1 | Prokaryotic ribosomal protein L17 |
| View | Download | 0.283 | g.2.2 | Neurotoxin B-IV |
| View | Download | 0.281 | a.2.7 | tRNA-binding arm |
| View | Download | 0.280 | d.188.1 | Prokaryotic ribosomal protein L17 |
| View | Download | 0.279 | a.8.2 | Plasmid maintenance system epsilon/zeta, antidote epsilon subunit |
| View | Download | 0.278 | a.1.1 | Globin-like |
| View | Download | 0.277 | a.4.6 | C-terminal effector domain of the bipartite response regulators |
| View | Download | 0.272 | a.4.1 | Homeodomain-like |
| View | Download | 0.272 | a.55.1 | IHF-like DNA-binding proteins |
| View | Download | 0.270 | a.60.2 | RuvA domain 2-like |
| View | Download | 0.262 | a.181.1 | Antibiotic binding domain of TipA-like multidrug resistance regulators |
| View | Download | 0.261 | a.52.1 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin |
| View | Download | 0.255 | d.43.1 | Elongation factor Ts (EF-Ts), dimerisation domain |
| View | Download | 0.249 | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.246 | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.245 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.244 | a.36.1 | Signal peptide-binding domain |
| View | Download | 0.236 | d.49.1 | Signal recognition particle alu RNA binding heterodimer, SRP9/14 |
| View | Download | 0.234 | a.28.1 | ACP-like |
| View | Download | 0.233 | a.29.4 | RecG, N-terminal domain |
| View | Download | 0.227 | f.34.1 | Mechanosensitive channel protein MscS (YggB), transmembrane region |
| View | Download | 0.227 | a.13.1 | alpha-2-Macroglobulin receptor associated protein (RAP) domain 1 |
| View | Download | 0.227 | a.4.1 | Homeodomain-like |
| View | Download | 0.224 | a.16.1 | S15/NS1 RNA-binding domain |
| View | Download | 0.224 | a.112.1 | Description not found. |
| View | Download | 0.220 | a.4.1 | Homeodomain-like |
| View | Download | 0.218 | a.2.3 | Chaperone J-domain |
| View | Download | 0.217 | a.60.9 | lambda integrase-like, N-terminal domain |
| View | Download | 0.214 | a.4.1 | Homeodomain-like |
| View | Download | 0.209 | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.208 | a.177.1 | Sigma2 domain of RNA polymerase sigma factors |
| View | Download | 0.208 | a.76.1 | Iron-dependent represor protein, dimerization domain |
| View | Download | 0.205 | i.11.1 | Computational models partly based on NMR data |
| View | Download | 0.201 | a.74.1 | Cyclin-like |
| View | Download | 0.200 | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
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Region A: Residues: [73-395] |
1 11 21 31 41 51
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1 PLSKEAIFRA KQKYGILNTP ANYKTLGLGD SKSESVDLAA RLASKRTKVS PDDCVETAIE 60
61 QKARGEAFKV TFSKIPLTPP EDVPITVNLG LKGRRDFLTR LAAQKALAFS PSLDNSMKGT 120
121 SDSSSVKKKR FSGAPIGNEF DANLVNPQHP AGFKSLDLSK VLDGAERRAI SRVNDRLYPQ 180
181 KVNFKNGLQS SDQSGVSKAN KEVFKKGTLE KLEHSAEQFL ESHAGNERQR LSDQQYMCAK 240
241 GAADAVKDLD PKTLEDPDFA AREAQKKLYI KQVASPVVLN EAQKLANRKL QDIDSRDTYM 300
301 LLFGNQAYNK LAVNIALQHY SVK
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| Detection Method: | |
| Confidence: | 13.154902 |
| Match: | 1i84S_ |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
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Region A: Residues: [396-619] |
1 11 21 31 41 51
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1 QEEKKKIYLG GGLWMTPEEV NAVAKKLISP VVNEIDERAS RQRDVDKDIE RRSRVLDQEY 60
61 EDGNSMERAK EQNDGQLLLA MASKQQQEKE AKKAEEGQRY DQFVQKMNIK LQQKEKELEN 120
121 ARENRENLRN ELQERLSKNL SGENDELNDW NDACERDLKN SSIEHYYAVR SHFDNLGNSE 180
181 RGYDELLEER SKIQVEIERL VASIAEHKTA IHGFGETADA GGAI
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| Detection Method: | |
| Confidence: | 8.045757 |
| Match: | 1c1gA_ |
| Description: | Tropomyosin |
Matching Structure (courtesy of the PDB): |
|
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Region A: Residues: [620-868] |
1 11 21 31 41 51
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1 PAVQKQKIPT RKDLLDATVN DPLVISAEMA KEEAEMATEE CMLKELQVDE MIIIRNIMLR 60
61 ECEKKLEEEK ETAKRSRRGT EESKNNSNFS RDVIMSTPDN NEKVTPIGKS ASPKDVVKSR 120
121 FLSTYNTGKD IDSSASARSI TGVSGVLDDG PKTPTSNKEN ELIDDEVKSY KVHQAVDGTG 180
181 EDSIANKRDK SSRPAANSGG SITIEQFLFN KNADKQGLSK TESVTMKREP VVDQMDSKKG 240
241 HDFTHCNDN
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [869-922] |
1 11 21 31 41 51
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1 GRRSFSGFSQ GSIENDYSNE VTDDQDDQEG SEIRVRDSND SNTSPKESFF KEVI
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| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.233 | b.34.3 | Myosin S1 fragment, N-terminal domain |
| View | Download | 0.219 | d.47.1 | Ribosomal protein L11, N-terminal domain |
