Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YKL050C.
| Description | E-value | Query Range |
Subject Range |
|
|
4.0E-96 | [3..749] | [1144..1937] |
|
|
6.0E-96 | [3..749] | [1145..1938] |
|
|
1.0E-95 | [3..749] | [1146..1939] |
|
|
1.0E-95 | [3..749] | [99..892] |
|
|
2.0E-95 | [3..749] | [143..936] |
|
|
2.0E-95 | [3..749] | [1146..1939] |
|
Region A: Residues: [1-72] |
1 11 21 31 41 51
| | | | | |
1 MSLISALQTT DVESVQTSPE QITERKAVRV STLQESLHSS EMHRAAPETP RSISNSVHKL 60
61 KTIYSTYQQS GQ
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [73-395] |
1 11 21 31 41 51
| | | | | |
1 PLSKEAIFRA KQKYGILNTP ANYKTLGLGD SKSESVDLAA RLASKRTKVS PDDCVETAIE 60
61 QKARGEAFKV TFSKIPLTPP EDVPITVNLG LKGRRDFLTR LAAQKALAFS PSLDNSMKGT 120
121 SDSSSVKKKR FSGAPIGNEF DANLVNPQHP AGFKSLDLSK VLDGAERRAI SRVNDRLYPQ 180
181 KVNFKNGLQS SDQSGVSKAN KEVFKKGTLE KLEHSAEQFL ESHAGNERQR LSDQQYMCAK 240
241 GAADAVKDLD PKTLEDPDFA AREAQKKLYI KQVASPVVLN EAQKLANRKL QDIDSRDTYM 300
301 LLFGNQAYNK LAVNIALQHY SVK
|
| Detection Method: | |
| Confidence: | 13.154902 |
| Match: | 1i84S_ |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [396-619] |
1 11 21 31 41 51
| | | | | |
1 QEEKKKIYLG GGLWMTPEEV NAVAKKLISP VVNEIDERAS RQRDVDKDIE RRSRVLDQEY 60
61 EDGNSMERAK EQNDGQLLLA MASKQQQEKE AKKAEEGQRY DQFVQKMNIK LQQKEKELEN 120
121 ARENRENLRN ELQERLSKNL SGENDELNDW NDACERDLKN SSIEHYYAVR SHFDNLGNSE 180
181 RGYDELLEER SKIQVEIERL VASIAEHKTA IHGFGETADA GGAI
|
| Detection Method: | |
| Confidence: | 8.045757 |
| Match: | 1c1gA_ |
| Description: | Tropomyosin |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [620-868] |
1 11 21 31 41 51
| | | | | |
1 PAVQKQKIPT RKDLLDATVN DPLVISAEMA KEEAEMATEE CMLKELQVDE MIIIRNIMLR 60
61 ECEKKLEEEK ETAKRSRRGT EESKNNSNFS RDVIMSTPDN NEKVTPIGKS ASPKDVVKSR 120
121 FLSTYNTGKD IDSSASARSI TGVSGVLDDG PKTPTSNKEN ELIDDEVKSY KVHQAVDGTG 180
181 EDSIANKRDK SSRPAANSGG SITIEQFLFN KNADKQGLSK TESVTMKREP VVDQMDSKKG 240
241 HDFTHCNDN
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [869-922] |
1 11 21 31 41 51
| | | | | |
1 GRRSFSGFSQ GSIENDYSNE VTDDQDDQEG SEIRVRDSND SNTSPKESFF KEVI
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
